Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_L21
(893 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.8
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 23 5.0
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 5.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.6
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 8.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 8.7
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 110 QEVDDD*LKNWCPLLF*ESVHLISLKYYGSK 202
QEV LKN LF + + +++K +GSK
Sbjct: 33 QEVKQSFLKNQLQALFQPTDNKLAMKLFGSK 63
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 328 LHRISSISSFWSRLLTA*LSFSLIVSSLCLAGFEDD 221
+H SS +W + L +LI+ + ++ F DD
Sbjct: 81 IHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDD 116
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 110 QEVDDD*LKNWCPLLF*ESVHLISLKYYGSK 202
QEV LKN LF + + +++K +GSK
Sbjct: 33 QEVKQSFLKNQLQALFQPTDNKLAMKLFGSK 63
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 328 LHRISSISSFWSRLLTA*LSFSLIVSSLCLAGFEDD 221
+H SS +W + L +LI+ + ++ F DD
Sbjct: 81 IHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDD 116
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 110 QEVDDD*LKNWCPLLF*ESVHLISLKYYGSK 202
QEV LKN LF + + +++K +GSK
Sbjct: 33 QEVKQSFLKNQLQALFQPTDNKLAMKLFGSK 63
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 328 LHRISSISSFWSRLLTA*LSFSLIVSSLCLAGFEDD 221
+H SS +W + L +LI+ + ++ F DD
Sbjct: 81 IHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDD 116
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 22.6 bits (46), Expect = 5.0
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -1
Query: 98 IATIILVISLFDKCKCNQNLKE 33
IA ++ ++ LFDKC ++++
Sbjct: 9 IAVLLAIVFLFDKCSGYPSIRQ 30
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 442 EFPNSYPYAPPVVKFMTP 495
EFP+ P+AP ++ +TP
Sbjct: 876 EFPSVRPFAPLLLLHLTP 893
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 753 IKHTYNLXNRL*VFMXIVXSSKYF 682
+ H YNL N+L F+ + + Y+
Sbjct: 210 LNHDYNLENKLNYFIEDIGLNTYY 233
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 753 IKHTYNLXNRL*VFMXIVXSSKYF 682
+ H YNL N+L F+ + + Y+
Sbjct: 210 LNHDYNLENKLIYFIEDIGLNTYY 233
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 8.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 385 PSMDL*KTVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPN 510
P++ L + Y+G +L P S + V ++ HPN
Sbjct: 363 PNVTLPTSTYSGSPTELPKHLPTSLTKSKMEVMELSDLHHPN 404
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 789 KL*LLXVGWAXVCLL 833
KL LL GW +CL+
Sbjct: 391 KLVLLNFGWQMICLI 405
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,914
Number of Sequences: 438
Number of extensions: 4807
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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