Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_L19
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91349-1|CAA62690.1| 858|Homo sapiens de-ubiquitinase protein. 63 1e-09
U47927-1|AAC50465.1| 858|Homo sapiens isopeptidase T protein. 63 2e-09
U47924-8|AAB51314.1| 835|Homo sapiens isopeptidase T protein. 63 2e-09
U47924-7|AAB51315.1| 858|Homo sapiens isopeptidase T protein. 63 2e-09
U35116-1|AAA78934.1| 835|Homo sapiens ubiquitin isopeptidase T ... 63 2e-09
BC005139-1|AAH05139.1| 858|Homo sapiens USP5 protein protein. 63 2e-09
BC004889-1|AAH04889.1| 835|Homo sapiens ubiquitin specific pept... 63 2e-09
U75362-1|AAC63405.1| 863|Homo sapiens isopeptidase T-3 protein. 58 4e-08
BC016146-1|AAH16146.1| 863|Homo sapiens ubiquitin specific pept... 58 4e-08
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 31 7.5
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 31 7.5
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 31 7.5
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 31 7.5
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 31 7.5
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 31 7.5
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 31 7.5
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 31 7.5
>X91349-1|CAA62690.1| 858|Homo sapiens de-ubiquitinase protein.
Length = 858
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLYV + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYVCMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>U47927-1|AAC50465.1| 858|Homo sapiens isopeptidase T protein.
Length = 858
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLY+ + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>U47924-8|AAB51314.1| 835|Homo sapiens isopeptidase T protein.
Length = 835
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLY+ + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>U47924-7|AAB51315.1| 858|Homo sapiens isopeptidase T protein.
Length = 858
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLY+ + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>U35116-1|AAA78934.1| 835|Homo sapiens ubiquitin isopeptidase T
protein.
Length = 835
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLY+ + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>BC005139-1|AAH05139.1| 858|Homo sapiens USP5 protein protein.
Length = 858
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLY+ + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>BC004889-1|AAH04889.1| 835|Homo sapiens ubiquitin specific
peptidase 5 (isopeptidase T) protein.
Length = 835
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTG 350
+ P V+KDEC +SFD PESE GLY+ + + LG G+ YVE++F KTG
Sbjct: 17 RVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNKTG 66
Score = 54.4 bits (125), Expect = 5e-07
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +1
Query: 358 IFLHIRREKQPIPXPEXTGDG--PXXXITRLAIGVEGGFDPXCGKPKXTYTDHYXVVVLP 531
++LH+RR ++P TG G P TRLAIGVEGGFD + K + +V+LP
Sbjct: 69 VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFD--LSEEKFELDEDVKIVILP 126
Query: 532 XXHTXPWPD-PNLPEPVKKSVXAVIDAESPFKXAELAALQGTWDGEXREV 678
LP+ V+ V + ++A A WDGE R+V
Sbjct: 127 DYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQV 176
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/53 (43%), Positives = 25/53 (47%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S H+ LKQLDN RIPP KC KC SILCG F+ G
Sbjct: 177 SKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGG 229
>U75362-1|AAC63405.1| 863|Homo sapiens isopeptidase T-3 protein.
Length = 863
Score = 58.0 bits (134), Expect = 4e-08
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTGNA 356
+ P VYK+EC +S+D+P SE GLYV + + L GR +VE++F+KTG +
Sbjct: 36 RVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTGQS 87
Score = 44.4 bits (100), Expect = 6e-04
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S ++ L QLDNG RIPPS KC +C S+LCG F+ G
Sbjct: 189 SKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGG 241
>BC016146-1|AAH16146.1| 863|Homo sapiens ubiquitin specific
peptidase 13 (isopeptidase T-3) protein.
Length = 863
Score = 58.0 bits (134), Expect = 4e-08
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 201 KXPGPHQLVYKDECVYSFDNPESETGLYVSLVSXLGXGRNYVEQYFQKTGNA 356
+ P VYK+EC +S+D+P SE GLYV + + L GR +VE++F+KTG +
Sbjct: 36 RVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTGQS 87
Score = 44.4 bits (100), Expect = 6e-04
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 678 SVHSVXLKQLDNGXRIPPSXXKCXKCXXXXXXXXXXXXXSILCGXXLFNXPXG 836
S ++ L QLDNG RIPPS KC +C S+LCG F+ G
Sbjct: 189 SKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGG 241
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 122 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 181
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 182 PFIYNLSSIS 191
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 30.7 bits (66), Expect = 7.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 553 PDPNLPEPVKKSVXAVIDAESPF-KXAELAALQGTWDGEXREVLYTLXTSSSWTMVXVYL 729
PDP P+ V + + + LA+ QG++DG + +L T +S + T + +L
Sbjct: 124 PDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHL 183
Query: 730 HLXXNVKSVT 759
N+ S++
Sbjct: 184 PFIYNLSSIS 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,179,030
Number of Sequences: 237096
Number of extensions: 1876600
Number of successful extensions: 3437
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3430
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -