Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_L16
         (1066 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    31   0.058
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    30   0.10 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   2.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   5.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   6.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   6.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   6.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   6.7  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 31.1 bits (67), Expect = 0.058
 Identities = 19/75 (25%), Positives = 22/75 (29%)
 Frame = +2

Query: 842  PGPPXHXSPRPXXRXSXXXCXPPPPPPXRNXXXXLXXPPXXEGSPSXXXGWGPXPPXRXG 1021
            P P  H  P    + +     P  P P       +  PP   G P       P PP   G
Sbjct: 157  PAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGG 216

Query: 1022 XXHPPXXPXXPXXPQ 1066
                P     P  PQ
Sbjct: 217  MYPQPPGVPMPMRPQ 231



 Score = 24.2 bits (50), Expect = 6.7
 Identities = 21/83 (25%), Positives = 22/83 (26%)
 Frame = +2

Query: 806  PPXXXPPXQXPXPGPPXHXSPRPXXRXSXXXCXPPPPPPXRNXXXXLXXPPXXEGSPSXX 985
            P    PP     P       P+P          P  P P R        PP     P   
Sbjct: 189  PQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQM-----PPG--AVPGMQ 241

Query: 986  XGWGPXPPXRXGXXHPPXXPXXP 1054
             G  P PP   G   PP     P
Sbjct: 242  PGMQPRPPSAQGMQRPPMMGQPP 264


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 0.10
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -1

Query: 556 GXGGGTXXRXGVGGXGVAXXLGGGLXNVTPKGQXALXXGGGGXXXXXGXTAS 401
           G GGGT    G G  G +  LG  L + +   Q  L  G GG     G   S
Sbjct: 251 GTGGGTGGSGGAGSGGSSGNLGSHLHHPSIVSQNDLKLGLGGMGVGVGGNLS 302


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
 Frame = -1

Query: 556 GXGGGTXXRXGVGGXGVAXXLGGGLXNVTPKGQXAL---XXGGGGXXXXXGXTASRPPPG 386
           G GGG     G GG G +   GGG    +  G   +       G      G  A     G
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMSTG 716

Query: 385 AGVTLXSKXXGRCXTXG 335
           AGV       G C + G
Sbjct: 717 AGVNRGG--DGGCGSIG 731



 Score = 25.0 bits (52), Expect = 3.8
 Identities = 17/57 (29%), Positives = 19/57 (33%)
 Frame = -1

Query: 550 GGGTXXRXGVGGXGVAXXLGGGLXNVTPKGQXALXXGGGGXXXXXGXTASRPPPGAG 380
           GGG      V   G A   GGG+  +   G      G GG     G   S    G G
Sbjct: 688 GGGMIGMHSVAA-GAAVAAGGGVAGMMSTGAGVNRGGDGGCGSIGGEVGSVGGGGGG 743


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -2

Query: 921 GGGGGGXQXXXEXRXXGRGEX*XGGPGXGXCXGG 820
           G GGGG          G G    GG G G   GG
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871



 Score = 24.2 bits (50), Expect = 6.7
 Identities = 17/61 (27%), Positives = 19/61 (31%)
 Frame = -1

Query: 556 GXGGGTXXRXGVGGXGVAXXLGGGLXNVTPKGQXALXXGGGGXXXXXGXTASRPPPGAGV 377
           G GGG+    G    G     GGG      +G      G G      G    R   G G 
Sbjct: 518 GGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVGA 577

Query: 376 T 374
           T
Sbjct: 578 T 578


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 550 GGGTXXRXGVGGXGVAXXLGGGLXNVTPK 464
           GGGT      GG G     GGGL + + K
Sbjct: 190 GGGTNGCTKAGGGGGGTGTGGGLVSSSEK 218


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 836 PXPGPPXHXSPRPXXRXSXXXCXPPPPPP 922
           P  GPP H +       +     PPPPPP
Sbjct: 508 PNDGPP-HGAGYDGRDLTGGPLGPPPPPP 535



 Score = 24.2 bits (50), Expect = 6.7
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +1

Query: 673 PXXXGVXPPXXPPPPXXNTPXKTP 744
           P      PP  PPPP    P  +P
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSP 597


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 685 GVXPPXXPPPPXXNTPXKTP 744
           G  PP  PPPP   +P   P
Sbjct: 781 GSPPPPPPPPPSSLSPGGVP 800


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 556 GXGGGTXXRXGVGGXGVAXXLGG 488
           G GGG     GVGG G+   LGG
Sbjct: 556 GGGGGGGGGGGVGG-GIGLSLGG 577


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
 Frame = -1

Query: 556 GXGGGTXXRXGVGGXGVAXXLGGGLXNVTPKGQXALXXG-GGGXXXXXGXTASRPPPGAG 380
           G GGG     G G    A        +V      A   G GGG     G ++  P PG G
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 24.2 bits (50), Expect = 6.7
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = -1

Query: 559 PGXGGGTXXRXGVGGXGVAXXLGGGLXNVTPKGQXALXXGGGGXXXXXG 413
           PG GGG+    G GG G     GGG  +   + +     GGG      G
Sbjct: 212 PGGGGGSSGGPGPGGGG-----GGGGRDRDHRDRDREREGGGNGGGGGG 255


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 556 GXGGGTXXRXGVGGXGVAXXLGG 488
           G GGG     GVGG G+   LGG
Sbjct: 557 GGGGGGGGGGGVGG-GIGLSLGG 578


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,771
Number of Sequences: 2352
Number of extensions: 11601
Number of successful extensions: 52
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 118807611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)