Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_L06
(909 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX088650-12|CAM26303.1| 198|Homo sapiens cutA divalent cation t... 42 0.002
BX088650-11|CAM26302.1| 179|Homo sapiens cutA divalent cation t... 42 0.002
BC107751-1|AAI07752.1| 156|Homo sapiens cutA divalent cation to... 42 0.002
BC005890-1|AAH05890.1| 156|Homo sapiens cutA divalent cation to... 42 0.002
AL662799-13|CAM25571.1| 198|Homo sapiens cutA divalent cation t... 42 0.002
AL662799-12|CAI18273.2| 179|Homo sapiens cutA divalent cation t... 42 0.002
AL050332-1|CAB63779.1| 156|Homo sapiens chromosome 6 open readi... 42 0.002
AL021366-6|CAA16160.1| 156|Homo sapiens cICK0721Q.5 (polypeptid... 42 0.002
AF230924-1|AAF61220.1| 136|Homo sapiens brain acetylcholinester... 42 0.002
AF106943-1|AAD21026.1| 156|Homo sapiens divalent cation toleran... 42 0.002
>BX088650-12|CAM26303.1| 198|Homo sapiens cutA divalent cation
tolerance homolog (E. coli) protein.
Length = 198
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 88 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 123
>BX088650-11|CAM26302.1| 179|Homo sapiens cutA divalent cation
tolerance homolog (E. coli) protein.
Length = 179
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 69 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 104
>BC107751-1|AAI07752.1| 156|Homo sapiens cutA divalent cation
tolerance homolog (E. coli) protein.
Length = 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 46 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 81
>BC005890-1|AAH05890.1| 156|Homo sapiens cutA divalent cation
tolerance homolog (E. coli) protein.
Length = 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 46 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 81
>AL662799-13|CAM25571.1| 198|Homo sapiens cutA divalent cation
tolerance homolog (E. coli) protein.
Length = 198
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 88 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 123
>AL662799-12|CAI18273.2| 179|Homo sapiens cutA divalent cation
tolerance homolog (E. coli) protein.
Length = 179
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 69 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 104
>AL050332-1|CAB63779.1| 156|Homo sapiens chromosome 6 open reading
frame 82 protein.
Length = 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 46 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 81
>AL021366-6|CAA16160.1| 156|Homo sapiens cICK0721Q.5 (polypeptide
from patented cDNA EMBL:E06811) protein.
Length = 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 46 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 81
>AF230924-1|AAF61220.1| 136|Homo sapiens brain acetylcholinesterase
putative membrane anchor protein.
Length = 136
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 26 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 61
>AF106943-1|AAD21026.1| 156|Homo sapiens divalent cation tolerant
protein CUTA protein.
Length = 156
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 385 SVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGIT 278
S +VT PN++V + I +V+ +LAACVN IP IT
Sbjct: 46 SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQIT 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,759,545
Number of Sequences: 237096
Number of extensions: 1758813
Number of successful extensions: 2251
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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