Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_L04
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    91   8e-19
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    88   9e-18
AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm rec...    31   1.1  
U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   4.6  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 91.5 bits (217), Expect = 8e-19
 Identities = 39/63 (61%), Positives = 51/63 (80%)
 Frame = +2

Query: 143 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 322
           MAPKQRM +AN+  SKN+  RGNV K+ K  ED+YP APWL+ LF+FVVCGSAVF+II+ 
Sbjct: 1   MAPKQRMTLANKQFSKNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRY 60

Query: 323 IRL 331
           +++
Sbjct: 61  VKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 87.8 bits (208), Expect = 9e-18
 Identities = 37/63 (58%), Positives = 49/63 (77%)
 Frame = +2

Query: 143 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 322
           MAPKQRM +AN   SKN+T RGNVPK  K  E ++P + WL+ LFIFVVCGSA+F++I+ 
Sbjct: 1   MAPKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRY 60

Query: 323 IRL 331
           I++
Sbjct: 61  IKV 63


>AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 83 protein.
          Length = 333

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = -3

Query: 408 LNFRWIVLLFYCVFDSSSPVVFVI*ASLIDWIIWNTAEPHTTKMKRARSQGA---TGYWS 238
           LN+  I ++ Y +F +S P++  +   +  W+   +A   T K K  + Q     T    
Sbjct: 197 LNYLNIAMIIYLIFCASIPMIISLVCGIKTWLQIRSAIDITDKSKTLQKQERQLFTALLI 256

Query: 237 SFSLVVLG-TFPLIVMF 190
            F +  LG T P++++F
Sbjct: 257 QFIIPFLGNTVPMLILF 273


>U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical
           protein F57F4.2 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = -1

Query: 662 IHYI-LMEFVA*VVFKNYIEKETKIHRKFYNRYLNVPNNLMYRR-PVLTPVSVKETSSHD 489
           +HYI +++FV   +F++YI+   K     YN YL +     +R   +++  +  +TS  D
Sbjct: 256 MHYIKILKFVLIAIFQSYIQFLKKTKYILYNCYLTILTFKNFREFEIVSSYTTIQTSKID 315

Query: 488 C-TVKGTNGRLR 456
             T K   G+ R
Sbjct: 316 SKTFKKLLGKFR 327


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 131 IKYICQFNNKLKGLEEPQRAISLDT*IKV 45
           I+Y+C+ NN+ KG+ +  RA   D  +K+
Sbjct: 44  IRYLCEKNNQCKGMRKNCRACRFDYCVKI 72


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 298 CCVPD--NPINKTSLNHEDNWRTA 363
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,273,250
Number of Sequences: 27780
Number of extensions: 401306
Number of successful extensions: 954
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)