Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_L02
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003317-1|AAO25077.1|  545|Drosophila melanogaster GH01086p pro...    31   2.7  
AY061006-1|AAL28554.1|  545|Drosophila melanogaster HL02140p pro...    31   2.7  
AF479079-1|AAL86452.1|  637|Drosophila melanogaster half pint pr...    31   2.7  
AF190745-1|AAF04132.1|  637|Drosophila melanogaster poly-U bindi...    31   2.7  
AE014296-262|AAG22222.2|  545|Drosophila melanogaster CG12085-PD...    31   2.7  
AE014296-261|AAF47502.1|  545|Drosophila melanogaster CG12085-PC...    31   2.7  
AE014296-260|AAG22221.1|  545|Drosophila melanogaster CG12085-PB...    31   2.7  
AE014296-259|AAF47501.1|  637|Drosophila melanogaster CG12085-PA...    31   2.7  

>BT003317-1|AAO25077.1|  545|Drosophila melanogaster GH01086p
           protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 318 PAGLQPLQAVVPTLPPPALLATPTLP 343


>AY061006-1|AAL28554.1|  545|Drosophila melanogaster HL02140p
           protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 318 PAGLQPLQAVVPTLPPPALLATPTLP 343


>AF479079-1|AAL86452.1|  637|Drosophila melanogaster half pint
           protein.
          Length = 637

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 410 PAGLQPLQAVVPTLPPPALLATPTLP 435


>AF190745-1|AAF04132.1|  637|Drosophila melanogaster poly-U binding
           splicing factor protein.
          Length = 637

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 410 PAGLQXLQAVVPTLPPPALLATPTLP 435


>AE014296-262|AAG22222.2|  545|Drosophila melanogaster CG12085-PD,
           isoform D protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 318 PAGLQPLQAVVPTLPPPALLATPTLP 343


>AE014296-261|AAF47502.1|  545|Drosophila melanogaster CG12085-PC,
           isoform C protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 318 PAGLQPLQAVVPTLPPPALLATPTLP 343


>AE014296-260|AAG22221.1|  545|Drosophila melanogaster CG12085-PB,
           isoform B protein.
          Length = 545

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 318 PAGLQPLQAVVPTLPPPALLATPTLP 343


>AE014296-259|AAF47501.1|  637|Drosophila melanogaster CG12085-PA,
           isoform A protein.
          Length = 637

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 595 PTGLXXIPXVXPXKPPPCALLFPTLP 672
           P GL  +  V P  PPP  L  PTLP
Sbjct: 410 PAGLQPLQAVVPTLPPPALLATPTLP 435


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,419,264
Number of Sequences: 53049
Number of extensions: 580553
Number of successful extensions: 1279
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)