Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_K23
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1021 - 10419383-10419529,10419684-10419733,10419821-104199...    52   5e-07
12_02_0855 + 23703827-23704019,23704465-23704481,23705051-237052...    30   2.1  
10_08_0176 + 15432092-15432470,15432592-15432688,15432801-154329...    30   2.8  
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913...    29   3.7  
03_02_0462 + 8669049-8669136,8669922-8670046,8670227-8670437,867...    29   6.5  
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304...    28   8.6  
06_02_0215 - 13145544-13146482,13148797-13149297                       28   8.6  
04_04_0523 - 25900802-25902548,25902640-25903037                       28   8.6  

>12_01_1021 -
           10419383-10419529,10419684-10419733,10419821-10419938,
           10420498-10420540,10420674-10420825,10420876-10420965,
           10422881-10423013,10424397-10424515
          Length = 283

 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +3

Query: 627 HSXEINIISYIMGWIYFAAWSVSXYPQIYINFKRKSVXG 743
           +S  + ++  ++GW+ F AWS S YPQ+++NFKRKSV G
Sbjct: 5   NSVGMEVLYQVLGWVAFFAWSFSFYPQVFLNFKRKSVVG 43


>12_02_0855 +
           23703827-23704019,23704465-23704481,23705051-23705254,
           23705486-23705605,23705867-23706472
          Length = 379

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -2

Query: 352 RFRSVTSTYILSNWECALGIPKIIITTKQKRIL*LEIEHAAARGLNTALHS 200
           R  S T T  L   +C LG+  +++    +  + +EI H+ A GLN  L++
Sbjct: 235 RSTSFTETVRLYGEKCGLGVKFLLLVNAVQATVDVEIIHSRACGLNLKLYA 285


>10_08_0176 +
           15432092-15432470,15432592-15432688,15432801-15432985,
           15433012-15433056,15433447-15433472,15435299-15435434,
           15435608-15435702
          Length = 320

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = +2

Query: 524 MRVRKESGTFGSDVQCYTARFCQLRHSIPTYXXHALXRNKHNIVHNGLDILRGL 685
           M+++  SG FG DV+ Y    C + +  P Y  + +    ++     L  L  L
Sbjct: 217 MKLKVSSGEFGLDVEDYLTGLCFMSNDFPRYVVNRVTAGDYDCPRKVLSFLTDL 270


>01_01_1149 -
           9134390-9134600,9134732-9134790,9135650-9135724,
           9135815-9135934,9136012-9136183,9136277-9136335,
           9136516-9136572,9136900-9136998,9137088-9137114,
           9137607-9137649,9137779-9138023
          Length = 388

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 660 MGWIYFAAWSVSXYPQIYINFKRKSVXGSTSIF 758
           +G +   +W V+  PQI  N+K KS  G +  F
Sbjct: 43  LGLLSVISWGVAEVPQIITNYKHKSTEGLSLAF 75


>03_02_0462 +
           8669049-8669136,8669922-8670046,8670227-8670437,
           8670515-8670752,8671004-8671154,8671353-8671718
          Length = 392

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 396 QYNTSLEVISNIQHPDIVXLVPPSIE 473
           ++ T + VISN++HP++V L+   +E
Sbjct: 95  EFLTEINVISNVRHPNLVKLIGCCVE 120


>09_04_0609 -
           18929600-18929646,18929753-18929924,18930304-18930498,
           18930691-18930801,18930885-18931097,18931643-18931720,
           18931894-18932001,18932175-18932316,18932413-18933761,
           18934492-18935121
          Length = 1014

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 309 SQLDKMYVEVTDLNLLVEETRLLKLVQIGQYNTSL-EVISNIQHPDIVXLVPPSIEIP 479
           + LD     + +LN+  +      ++Q  Q N  +   +SN+ H D V ++PP I +P
Sbjct: 322 TMLDSSDFSLKNLNISPDILSSSYVMQQWQKNAPVWNGLSNVVHGDHVPMIPPGINLP 379


>06_02_0215 - 13145544-13146482,13148797-13149297
          Length = 479

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +3

Query: 201 ECSAVLRPRAAA---CSISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLVEETR 371
           + SAV+R  AAA      ++ R R+ L   ++ G+ + HS    ++ ++   NLL+ E  
Sbjct: 102 DLSAVVRAAAAARPSALPAAQRKRWML--QVLEGVAACHSA-GVVHRDLKPANLLISEDG 158

Query: 372 LLKLVQIGQ 398
           +LK+  +GQ
Sbjct: 159 VLKVADLGQ 167


>04_04_0523 - 25900802-25902548,25902640-25903037
          Length = 714

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/70 (22%), Positives = 31/70 (44%)
 Frame = +2

Query: 539 ESGTFGSDVQCYTARFCQLRHSIPTYXXHALXRNKHNIVHNGLDILRGLVSFVLPSNIHK 718
           E+   G   +  +A FC++ +  P Y  H   + KH   H G      ++  +L  + + 
Sbjct: 273 EANVLGVLAEVLSAVFCEVMNGKPEYTDHLTHKLKH---HPGQIEAAAIMEHILEGSSYM 329

Query: 719 LQEEKRGRLN 748
           +  +K G L+
Sbjct: 330 MLAKKLGELD 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,710,611
Number of Sequences: 37544
Number of extensions: 394259
Number of successful extensions: 878
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)