Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_K23
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    65   7e-11
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    65   7e-11
AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical ...    34   0.12 
Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = +3

Query: 588 VNLDTVYLRIXVMHSXEINIISYIMGWIYFAAWSVSXYPQIYINFKRKSVXG 743
           ++L+  + RI V+ S  + I+  I+GW YF AWS+S YPQ+Y+NFKRKSV G
Sbjct: 108 LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVG 159


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = +3

Query: 588 VNLDTVYLRIXVMHSXEINIISYIMGWIYFAAWSVSXYPQIYINFKRKSVXG 743
           ++L+  + RI V+ S  + I+  I+GW YF AWS+S YPQ+Y+NFKRKSV G
Sbjct: 108 LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVG 159


>AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical
           protein Y43H11AL.2 protein.
          Length = 311

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +3

Query: 636 EINIISYIMGWIYFAAWSVSXYPQIYINFKRKSVXGSTSIF 758
           ++ ++ +I+G I  A W +  +PQ++ N+K K   G +  F
Sbjct: 37  DLKLLGFIIGLISLALWLIPLFPQLWQNYKTKKCEGLSLAF 77


>Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical
           protein W08D2.3b protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +3

Query: 243 ISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLV 359
           I+ + +   ++V+I++ I S H+Q+++M    + LNL V
Sbjct: 442 IAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFV 480


>Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical
           protein W08D2.3a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +3

Query: 243 ISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLV 359
           I+ + +   ++V+I++ I S H+Q+++M    + LNL V
Sbjct: 445 IAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFV 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,016,452
Number of Sequences: 27780
Number of extensions: 364155
Number of successful extensions: 837
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)