Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_K21
(988 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 39 0.006
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 35 0.078
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.24
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 33 0.31
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.55
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.55
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.55
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.55
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.55
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.55
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.55
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 0.96
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 31 1.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 5.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.9
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 28 8.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 8.9
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.9
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 8.9
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 8.9
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.006
Identities = 29/95 (30%), Positives = 32/95 (33%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G+G GG+G GP G G G F G G GG
Sbjct: 125 GGGGYGGYGGGGYGGMG---GGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDG 181
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
G GG G G G GG GGG G+G
Sbjct: 182 GYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYG 216
Score = 35.9 bits (79), Expect = 0.044
Identities = 29/101 (28%), Positives = 33/101 (32%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
GP G+G GG G G G G G + G G GG
Sbjct: 143 GPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGG 202
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFGHTFXLG 642
G G G G GG GG P GG G G + +G
Sbjct: 203 GGYGGGGMGG-GGYGGGGDGGYGPSGGYGGGYGPGGGYGMG 242
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 35.1 bits (77), Expect = 0.078
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 791 GGXXXXXXXGXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
GG G GG G G GG C GG GGG A G G
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSG 141
Score = 32.7 bits (71), Expect = 0.41
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
G GG G CG GG C GG G G G G
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCG 125
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVX-GLPRFXGXGEKVXPXGGXXXXXX 768
G G G GG G G G G G G G V P GG
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
Query: 767 XGXGGXGXXXXFCGXGGXCXGGXXPGGGXXA 675
GG G G GG C GG GGG A
Sbjct: 195 GSSGGGGYAVAPSG-GGGCGGGGSSGGGGYA 224
Score = 33.5 bits (73), Expect = 0.24
Identities = 27/95 (28%), Positives = 27/95 (28%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G G GG G G G G G G P
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
G GG G CG GG C GG GG G G
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 120
Score = 33.1 bits (72), Expect = 0.31
Identities = 28/97 (28%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G G GG G G G G G G GG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGG 119
Query: 764 GXGGXGXXXXFC--GXGGXCXGGXXPGGGXXAXXGFG 660
G GG G C G GG C GG G G + G G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCG 156
Score = 33.1 bits (72), Expect = 0.31
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -3
Query: 929 GXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXXGXGGX 750
G GG G G G G G G G GG G GG
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 749 GXXXXFCGXGGXCXGGXXPGGG 684
G G GG C GG GGG
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGG 180
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G G GG G G G G G G V P GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGG 216
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFGHTFXLG 642
GG G G GG G GG G + G
Sbjct: 217 SSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSG 257
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVX-GLPRFXGXGEKVXPXGGXXXXXX 768
G G G GG G G G G G G G V P GG
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
Query: 767 XGXGGXGXXXXFCGXGGXCXGGXXPGGGXXA 675
GG G G GG C GG GGG A
Sbjct: 195 GSSGGGGYAVAPSG-GGGCGGGGSSGGGGYA 224
Score = 33.5 bits (73), Expect = 0.24
Identities = 27/95 (28%), Positives = 27/95 (28%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G G GG G G G G G G P
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
G GG G CG GG C GG GG G G
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 120
Score = 33.1 bits (72), Expect = 0.31
Identities = 28/97 (28%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G G GG G G G G G G GG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGG 119
Query: 764 GXGGXGXXXXFC--GXGGXCXGGXXPGGGXXAXXGFG 660
G GG G C G GG C GG G G + G G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCG 156
Score = 33.1 bits (72), Expect = 0.31
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = -3
Query: 929 GXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXXGXGGX 750
G GG G G G G G G G GG G GG
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Query: 749 GXXXXFCGXGGXCXGGXXPGGG 684
G G GG C GG GGG
Sbjct: 159 GGGGCGGGGGGGCGGGSSGGGG 180
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
G G G GG G G G G G G V P GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGG 216
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFGHTFXLG 642
GG G G GG G GG G + G
Sbjct: 217 SSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSG 257
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGG 684
G GG G CG GG C GG GGG
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGGGCGGG 51
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
G GG G CG GG C GG GG G G
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 102
Score = 31.9 bits (69), Expect = 0.72
Identities = 28/88 (31%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = -3
Query: 941 PXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXG-GXXXXXXX 765
P G G GG G G G G P G G G G
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCG 80
Query: 764 GXGGXGXXXXFCGXGGX-CXGGXXPGGG 684
G GG G CG GG C GG GGG
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXP 693
G GG G CG GG C GG P
Sbjct: 88 GGGGCGGGGGGCGGGGGCGGGCAP 111
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 791 GGXXXXXXXGXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
GG G GG G CG GG GG GGG G G
Sbjct: 150 GGGGGGCGGGGGGCGGGGGGCGGGG--GGGCGGGGGGGCGGGCG 191
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 758 GGXGXXXXFCGXGGX-CXGGXXPGGGXXAXXGFG 660
GG G CG GG C GG GGG G G
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -3
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFGH 657
G GG G CG GG C GG GGG G G+
Sbjct: 27 GAGGCGGGGG-CGGGGGCGGGCGYGGGGGCGYGGGY 61
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 666 PXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPP 794
P P PP PP PPP P P P P PP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +3
Query: 666 PXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXKTXXPXY 842
P P PP PP PPP P P P + P PP + P P +
Sbjct: 40 PPPLPCPPPPICPPQFCPPPP--MCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAPVF 96
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXS--XKTXXPXYXFP 851
P PP PP PPP G P P + AP + P K P FP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 820
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXP 779
P PP PP + PPP PG P P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 666 PXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXKTXXP 836
P G PP PP PPP PG P P PP L P S P
Sbjct: 708 PITGGPPPPPGLPPITGGPPP-PPPPGGLPPITG--GPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXS--XKTXXPXYXFP 851
P PP PP PPP G P P + AP + P K P FP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 820
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXP 779
P PP PP + PPP PG P P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 666 PXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXKTXXP 836
P G PP PP PPP PG P P PP L P S P
Sbjct: 708 PITGGPPPPPGLPPITGGPPP-PPPPGGLPPITG--GPPPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXS--XKTXXPXYXFP 851
P PP PP PPP G P P + AP + P K P FP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFP 403
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXP 779
P PP PP + PPP PG P P P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 666 PXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXKTXXP 836
P G PP PP PPP PG P P PP L P S P
Sbjct: 291 PITGGPPPPPGLPPITGGPPP-PPPPGGLPPITG--GPPPPPPPGGLPPISGGPPPP 344
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.55
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = +1
Query: 754 PPXPXXXXXXXPPXGXTFSPXPXKRGSPXTXFPXSXXYSPXG--PXXXGXXSPKPPXXXX 927
PP P P G P P GSP S P G P SP PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 928 PNPXGP 945
P P P
Sbjct: 297 PPPPPP 302
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 754 PPXPXXXXXXXPPXGXTFSPXPXKRGSPXTXFPXSXXYSPXGPXXXGXXSPKPP 915
PP P PP + P P RGSP T + P G SP PP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPPPAGTGSPPPP 332
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPP-AKXXP---GTXXPXPXXLXPXXAP 791
P PPR PP PPP A P GT P P AP
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.55
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = +1
Query: 754 PPXPXXXXXXXPPXGXTFSPXPXKRGSPXTXFPXSXXYSPXG--PXXXGXXSPKPPXXXX 927
PP P P G P P GSP S P G P SP PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 928 PNPXGP 945
P P P
Sbjct: 318 PPPPPP 323
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 754 PPXPXXXXXXXPPXGXTFSPXPXKRGSPXTXFPXSXXYSPXGPXXXGXXSPKPP 915
PP P PP + P P RGSP T + P G SP PP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPPPAGTGSPPPP 353
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPP-AKXXP---GTXXPXPXXLXPXXAP 791
P PPR PP PPP A P GT P P AP
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.55
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = +1
Query: 754 PPXPXXXXXXXPPXGXTFSPXPXKRGSPXTXFPXSXXYSPXG--PXXXGXXSPKPPXXXX 927
PP P P G P P GSP S P G P SP PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 928 PNPXGP 945
P P P
Sbjct: 303 PPPPPP 308
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 754 PPXPXXXXXXXPPXGXTFSPXPXKRGSPXTXFPXSXXYSPXGPXXXGXXSPKPP 915
PP P PP + P P RGSP T + P G SP PP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPPPAGTGSPPPP 338
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPP-AKXXP---GTXXPXPXXLXPXXAP 791
P PPR PP PPP A P GT P P AP
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +3
Query: 687 PPRXXPPXAXXP----PPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXK 824
PP+ PP P PP P P P APP +LFP + K
Sbjct: 132 PPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRPQAPAAPPPKSLFPSAQK 181
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 787 AXSGXRXXGXGXXVPGXXFAGGGXLAXGGXXRGGVXGPXXG 665
A +G G G V F GGG GG GG GP G
Sbjct: 260 AFNGGGGGGGGMNVGAAGFGGGGGQGYGGPQFGGQGGPQFG 300
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +3
Query: 666 PXXGPXTPPRXXPPXAXXP---PPAKXXPGTXXPXPXXLXPXXAPP 794
P GP P PP PP PG P P P APP
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 10/83 (12%)
Frame = +1
Query: 727 PQXXHXXPXP-----PXPXXXXXXXPPXGXT---FSPXPXKRGSPXTXFPXSXXY-SPXG 879
PQ P P P P PP F+P P + G P P + +P G
Sbjct: 344 PQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPP-QSGPPGAFAPPPSAFGAPQG 402
Query: 880 PXXXGXXSPKPP-XXXXPNPXGP 945
P G P PP P GP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGP 425
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/51 (41%), Positives = 22/51 (43%)
Frame = -1
Query: 811 GKRFXXGGAXSGXRXXGXGXXVPGXXFAGGGXLAXGGXXRGGVXGPXXGLA 659
G R GG SG R G G G + GGG GG RGG G G A
Sbjct: 27 GGRGGGGGGYSGGRGGGYGGG-GGGGYGGGG---YGGGGRGGGRGGSNGSA 73
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +1
Query: 748 PXPPXPXXXXXXXP-PXGXTFSPXPXKRGSPXTXFPXSXXYSPXGPXXXGXXSPKPPXXX 924
P P P P P G SP P P SP GP G P P
Sbjct: 999 PVKPSPSGPSPNGPSPNGP--SPNGPSPNGPSPNGPTPNWPSPNGPSPNGPNGPSDPNKP 1056
Query: 925 XPN-PXGP 945
PN P GP
Sbjct: 1057 GPNGPNGP 1064
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +3
Query: 657 VAKPXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXKTXXP 836
V +P P PP PP PPAK P P P P P S P
Sbjct: 66 VGRPTESPPLPP---PPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 122
Query: 837 XY 842
Y
Sbjct: 123 LY 124
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +3
Query: 657 VAKPXXGPXTPPRXXPPXAXXPPPAKXXPGTXXPXPXXLXPXXAPPXXNLFPXSXKTXXP 836
V +P P PP PP PPAK P P P P P S P
Sbjct: 288 VGRPTESPPLPP---PPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 344
Query: 837 XY 842
Y
Sbjct: 345 LY 346
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/94 (29%), Positives = 28/94 (29%)
Frame = -3
Query: 944 GPXGFGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXXX 765
GP GFG GG G P GP G G G G G
Sbjct: 21 GP-GFGGPGFGGPGSGGP---GPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGG 76
Query: 764 GXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGF 663
G GG G G GG GGG GF
Sbjct: 77 GRGGGRGGNGGFGDNGGLRGGN--GGGRGGNGGF 108
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/90 (25%), Positives = 26/90 (28%), Gaps = 4/90 (4%)
Frame = +3
Query: 678 PXTPPRXXPPXAXXPPPAKXXPGTXXP----XPXXLXPXXAPPXXNLFPXSXKTXXPXYX 845
P TP R PP PP P + P P APP + P + P
Sbjct: 433 PKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEV 492
Query: 846 FPXLRXXFSXXXXGXGXSVPKTPPXXXPKP 935
SVP PP P P
Sbjct: 493 SKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = -3
Query: 944 GPXG-FGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXX 768
GP G G G G P G G+ G F G G V P G
Sbjct: 206 GPPGEAGSPGNPGIGSIGPK--GDPGDLGSVGPPGPPGPREFTGSGSIVGPRGNPGEKGD 263
Query: 767 XGXGGXGXXXXFCGXGGXCXGGXXPG 690
G G G + G GG PG
Sbjct: 264 KGEPGEGGQRGYPGNGGLSGQPGLPG 289
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 791 GGXXXXXXXGXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
GG G G G G GG GG GGG GFG
Sbjct: 22 GGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFG 65
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 793 GGAXSGXRXXGXGXXVPGXXFAGGGXLAXGGXXRGGVXGPXXG 665
GG G G G G GGG GG RGG G G
Sbjct: 78 GGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = -3
Query: 944 GPXG-FGXXXXGGFGDXXPXXXGPXGEXXXEXGKXVXGLPRFXGXGEKVXPXGGXXXXXX 768
GP G G G G P G G+ G F G G V P G
Sbjct: 206 GPPGEAGSPGNPGIGSIGPK--GDPGDLGSVGPPGPPGPREFTGSGSIVGPRGNPGEKGD 263
Query: 767 XGXGGXGXXXXFCGXGGXCXGGXXPG 690
G G G + G GG PG
Sbjct: 264 KGEPGEGGQRGYPGNGGLSGQPGLPG 289
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 791 GGXXXXXXXGXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
GG G G G G GG GG GGG GFG
Sbjct: 22 GGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFG 65
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 791 GGXXXXXXXGXGGXGXXXXFCGXGGXCXGGXXPGGGXXAXXGFG 660
GG G G G G GG GG GGG GFG
Sbjct: 22 GGFGGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFG 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.140 0.490
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,425,279
Number of Sequences: 27780
Number of extensions: 193588
Number of successful extensions: 908
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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