Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_K09
(940 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.004
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.062
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.073
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.073
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.073
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 35 0.097
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.39
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.39
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.39
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.51
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.51
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.90
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 0.90
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.6
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 31 1.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 30 2.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.7
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 6.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 8.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 25 8.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/109 (30%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRA---PXXRXGXPVXPPPRGXXXXPPKWGXTPG 598
P PP G GSPPP P A P R G P PPP G PP G P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPP- 290
Query: 599 KXLXXXGPXXAPXPXKXXXXXXXXXXXXXXXXLSKNXPPPFXGGXXPPP 745
P A P + PPP G PPP
Sbjct: 291 -------PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA---PXXRXG-XPVXPPPRG----X 562
G P PP G GSPPP P P R G P PPPRG
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Query: 563 XXXPPKWGXTP 595
PP+ G +P
Sbjct: 311 SLPPPQAGGSP 321
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 532 GTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPXGPXP 639
G+ PPP GG P+ G P P P G P
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPR--APXXRXGXPVXPPPRG--XXXXPPKWGXTP 595
P PP GG GSPPP PR P PP G PP+ G P
Sbjct: 307 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGG--P 364
Query: 596 GK 601
GK
Sbjct: 365 GK 366
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 940 GGGAPPPXXGXPPPXG*KERAPHPPXRG 857
G PPP G PPP P PP RG
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/109 (30%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRA---PXXRXGXPVXPPPRGXXXXPPKWGXTPG 598
P PP G GSPPP P A P R G P PPP G PP G P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPP- 311
Query: 599 KXLXXXGPXXAPXPXKXXXXXXXXXXXXXXXXLSKNXPPPFXGGXXPPP 745
P A P + PPP G PPP
Sbjct: 312 -------PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA---PXXRXG-XPVXPPPRG----X 562
G P PP G GSPPP P P R G P PPPRG
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Query: 563 XXXPPKWGXTP 595
PP+ G +P
Sbjct: 332 SLPPPQAGGSP 342
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 532 GTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPXGPXP 639
G+ PPP GG P+ G P P P G P
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPR--APXXRXGXPVXPPPRG--XXXXPPKWGXTP 595
P PP GG GSPPP PR P PP G PP+ G P
Sbjct: 328 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGG--P 385
Query: 596 GK 601
GK
Sbjct: 386 GK 387
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 940 GGGAPPPXXGXPPPXG*KERAPHPPXRG 857
G PPP G PPP P PP RG
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/109 (30%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRA---PXXRXGXPVXPPPRGXXXXPPKWGXTPG 598
P PP G GSPPP P A P R G P PPP G PP G P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPP- 296
Query: 599 KXLXXXGPXXAPXPXKXXXXXXXXXXXXXXXXLSKNXPPPFXGGXXPPP 745
P A P + PPP G PPP
Sbjct: 297 -------PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA---PXXRXG-XPVXPPPRG----X 562
G P PP G GSPPP P P R G P PPPRG
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Query: 563 XXXPPKWGXTP 595
PP+ G +P
Sbjct: 317 SLPPPQAGGSP 327
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 532 GTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPXGPXP 639
G+ PPP GG P+ G P P P G P
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPR--APXXRXGXPVXPPPRG--XXXXPPKWGXTP 595
P PP GG GSPPP PR P PP G PP+ G P
Sbjct: 313 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGG--P 370
Query: 596 GK 601
GK
Sbjct: 371 GK 372
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 940 GGGAPPPXXGXPPPXG*KERAPHPPXRG 857
G PPP G PPP P PP RG
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 488 GSPPPXPRAPXXRXGXPVXPPPRGXXXXP 574
G+PPP P P G P PPP G P
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
Score = 27.5 bits (58), Expect(2) = 0.062
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTP 595
PPP P P G P PPP PP G P
Sbjct: 562 PPPPPPLPQNLSGAPPPPPP-----PPPMLGGPP 590
Score = 26.6 bits (56), Expect(2) = 0.062
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 710 PPPFXGGXXPPPGP 751
PPP GG PPP P
Sbjct: 582 PPPMLGGPPPPPPP 595
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.073
Identities = 28/90 (31%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Frame = +2
Query: 488 GSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKXXXXXXX 667
G PPP P P G P PPP G PP G P P + P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 668 XXXXXXXXXLSKNXPPP--FXGGXXPPPGP 751
PPP F GG PPP P
Sbjct: 768 CPPPPP-------PPPPGGFKGGPPPPPPP 790
Score = 35.1 bits (77), Expect = 0.073
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +2
Query: 419 GXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA--PXXRXGXPVXPPPRGXXXXPPKWGXT 592
G P PP G + G PPP P P G P PPP G PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---PP 774
Query: 593 PGKXLXXXGPXXAPXP 640
P GP P P
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 416 GGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPP 577
GG P PP G + G PPP P P P PPP G PP
Sbjct: 733 GGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA--PXXRXGXPVXPPPRGXXXXPPK 580
GG P PP + G G PPP P P G P PPP G PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGG---LPPI 754
Query: 581 WGXTPGKXLXXXGPXXAPXP 640
G P G P P
Sbjct: 755 SGGPPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Frame = -2
Query: 597 PGVXPHLGGXXXXPLGGGX---TGXPXRXXGARGX---GGGEPXXXPKTX------PPXP 454
PG+ P GG P GG TG P G GG P P PP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 453 XGGXXXXXGKXPPXPP 406
GG G PP PP
Sbjct: 777 PGG--FKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 937 GGAPPPXXGXPPPXG*KERAPHPPXRG 857
GG PPP PPP G K P PP G
Sbjct: 766 GGCPPPPP-PPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.073
Identities = 28/90 (31%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Frame = +2
Query: 488 GSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKXXXXXXX 667
G PPP P P G P PPP G PP G P P + P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 668 XXXXXXXXXLSKNXPPP--FXGGXXPPPGP 751
PPP F GG PPP P
Sbjct: 768 CPPPPP-------PPPPGGFKGGPPPPPPP 790
Score = 35.1 bits (77), Expect = 0.073
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +2
Query: 419 GXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA--PXXRXGXPVXPPPRGXXXXPPKWGXT 592
G P PP G + G PPP P P G P PPP G PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---PP 774
Query: 593 PGKXLXXXGPXXAPXP 640
P GP P P
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 416 GGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPP 577
GG P PP G + G PPP P P P PPP G PP
Sbjct: 733 GGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA--PXXRXGXPVXPPPRGXXXXPPK 580
GG P PP + G G PPP P P G P PPP G PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGG---LPPI 754
Query: 581 WGXTPGKXLXXXGPXXAPXP 640
G P G P P
Sbjct: 755 SGGPPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Frame = -2
Query: 597 PGVXPHLGGXXXXPLGGGX---TGXPXRXXGARGX---GGGEPXXXPKTX------PPXP 454
PG+ P GG P GG TG P G GG P P PP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 453 XGGXXXXXGKXPPXPP 406
GG G PP PP
Sbjct: 777 PGG--FKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 937 GGAPPPXXGXPPPXG*KERAPHPPXRG 857
GG PPP PPP G K P PP G
Sbjct: 766 GGCPPPPP-PPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.073
Identities = 28/90 (31%), Positives = 29/90 (32%), Gaps = 2/90 (2%)
Frame = +2
Query: 488 GSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKXXXXXXX 667
G PPP P P G P PPP G PP G P P + P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 668 XXXXXXXXXLSKNXPPP--FXGGXXPPPGP 751
PPP F GG PPP P
Sbjct: 351 CPPPPP-------PPPPGGFKGGPPPPPPP 373
Score = 35.1 bits (77), Expect = 0.073
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +2
Query: 419 GXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA--PXXRXGXPVXPPPRGXXXXPPKWGXT 592
G P PP G + G PPP P P G P PPP G PP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP---PP 357
Query: 593 PGKXLXXXGPXXAPXP 640
P GP P P
Sbjct: 358 PPPGGFKGGPPPPPPP 373
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +2
Query: 416 GGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPP 577
GG P PP G + G PPP P P P PPP G PP
Sbjct: 316 GGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRA--PXXRXGXPVXPPPRGXXXXPPK 580
GG P PP + G G PPP P P G P PPP G PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITG---GPPPPPPPGGLPPITGGPPPPPPPGG---LPPI 337
Query: 581 WGXTPGKXLXXXGPXXAPXP 640
G P G P P
Sbjct: 338 SGGPPPPPPPPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Frame = -2
Query: 597 PGVXPHLGGXXXXPLGGGX---TGXPXRXXGARGX---GGGEPXXXPKTX------PPXP 454
PG+ P GG P GG TG P G GG P P PP P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 453 XGGXXXXXGKXPPXPP 406
GG G PP PP
Sbjct: 360 PGG--FKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 937 GGAPPPXXGXPPPXG*KERAPHPPXRG 857
GG PPP PPP G K P PP G
Sbjct: 349 GGCPPPPP-PPPPGGFKGGPPPPPPPG 374
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 34.7 bits (76), Expect = 0.097
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 404 RGGXGGXXPXXXXXPPXGXGGX-VFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPPK 580
+GG P PP G G G PP P P R G P P P G P
Sbjct: 249 QGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGN 308
Query: 581 WGXTPG 598
G TPG
Sbjct: 309 DG-TPG 313
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPP 553
P PP GG G+PPP P P P PPP
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 253
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXP 640
PPP P P PPP G G P L G P P
Sbjct: 202 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 250
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPP 553
P PP GG G+PPP P P P PPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXP 640
PPP P P PPP G G P L G P P
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPP 553
P PP GG G+PPP P P P PPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXP 640
PPP P P PPP G G P L G P P
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +1
Query: 448 PPGGXGXGFWXPXRFXXXXXXXXXXSXXGTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPX 627
PP G W P G PPP P MGG P P G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS-RFGPPGMGGMPPPPPPGMRYPG 345
Query: 628 GPXPLKGP 651
G P P
Sbjct: 346 GMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKXXXXXXXXX 673
PPP P P P PPP PP PG+ G P P
Sbjct: 274 PPPMPPTPGMT---PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM 330
Query: 674 XXXXXXXLSKNXPPP---FXGGXXPPPGP 751
PPP + GG PPP P
Sbjct: 331 GGMPP------PPPPGMRYPGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Frame = +2
Query: 536 PVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXA------PXPXKXXXXXXXXXXXXXXXXL 697
PV PPP PP TPG P + P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 698 SKNXPPPFXGGXXPPPGP 751
PP GG PPP P
Sbjct: 322 PSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 446 PPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTP 595
PP G G G PPP P G P PPPR P + P
Sbjct: 321 PPSRFGPPGMG---GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/108 (23%), Positives = 28/108 (25%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXL 607
P PP ++ PP P G P PPP P G P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP-PPPPPSRFGPPGMGGMPPPPPP 339
Query: 608 XXXGPXXAPXPXKXXXXXXXXXXXXXXXXLSKNXPPPFXGGXXPPPGP 751
P P P S+ PP G PPP P
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYPPPPP-SRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +1
Query: 448 PPGGXGXGFWXPXRFXXXXXXXXXXSXXGTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPX 627
PP G W P G PPP P MGG P P G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS-RFGPPGMGGMPPPPPPGMRYPG 355
Query: 628 GPXPLKGP 651
G P P
Sbjct: 356 GMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/89 (28%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKXXXXXXXXX 673
PPP P P P PPP PP PG+ G P P
Sbjct: 284 PPPMPPTPGMT---PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM 340
Query: 674 XXXXXXXLSKNXPPP---FXGGXXPPPGP 751
PPP + GG PPP P
Sbjct: 341 GGMPP------PPPPGMRYPGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Frame = +2
Query: 536 PVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXA------PXPXKXXXXXXXXXXXXXXXXL 697
PV PPP PP TPG P + P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 698 SKNXPPPFXGGXXPPPGP 751
PP GG PPP P
Sbjct: 332 PSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 446 PPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTP 595
PP G G G PPP P G P PPPR P + P
Sbjct: 331 PPSRFGPPGMG---GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/108 (23%), Positives = 28/108 (25%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXL 607
P PP ++ PP P G P PPP P G P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP-PPPPPSRFGPPGMGGMPPPPPP 349
Query: 608 XXXGPXXAPXPXKXXXXXXXXXXXXXXXXLSKNXPPPFXGGXXPPPGP 751
P P P S+ PP G PPP P
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYPPPPP-SRPPAPPSGHGMIPPPPP 396
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.90
Identities = 23/92 (25%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 491 SPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXL-XXXGPXXAPXPXKXXXXXXX 667
+PPP P G P P P+G P + G G GP AP
Sbjct: 146 TPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGA 205
Query: 668 XXXXXXXXXLSKNXPPPFXGGXXPPPGPXKXP 763
+ P G PPGP P
Sbjct: 206 PGQPGSDAQSESSPGAPGQAGPQGPPGPAGSP 237
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.90
Identities = 23/92 (25%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 491 SPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXL-XXXGPXXAPXPXKXXXXXXX 667
+PPP P G P P P+G P + G G GP AP
Sbjct: 146 TPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGA 205
Query: 668 XXXXXXXXXLSKNXPPPFXGGXXPPPGPXKXP 763
+ P G PPGP P
Sbjct: 206 PGQPGSDAQSESSPGAPGQAGPQGPPGPAGSP 237
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.90
Identities = 23/92 (25%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 491 SPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXL-XXXGPXXAPXPXKXXXXXXX 667
+PPP P G P P P+G P + G G GP AP
Sbjct: 146 TPPPCKPCPQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPGNPGQAGA 205
Query: 668 XXXXXXXXXLSKNXPPPFXGGXXPPPGPXKXP 763
+ P G PPGP P
Sbjct: 206 PGQPGSDAQSESSPGAPGQAGPQGPPGPAGSP 237
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Frame = -3
Query: 650 GPXRGXGPXGXPXPKGFFXGXPPIW-GEXXXPPWGGGKXVPXXEXXXXXXXXXGNRXGXQ 474
GP G GP G P P G P G PP GG P E G
Sbjct: 150 GPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGG---PQGEAGEDGGAGNPGTPGQV 206
Query: 473 KPXPXPPG 450
+ P PPG
Sbjct: 207 RSLPSPPG 214
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXP 538
GG GG P PP G GG G G PP P+ P G P
Sbjct: 616 GGPGG--PGGGGGPPRGPGGGGGGGPTG-PPAPPKPPAKPRGRP 656
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +1
Query: 445 PPPGGXGX-GFWXPXRFXXXXXXXXXXSXXGTXXPPPQGGXXXSPQMGGXPXKXPXGXGX 621
PPPGG G G + P + G PPP G P +G P P G
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG----FPPVGAPP---PGAAGA 464
Query: 622 PXGPXPLKGP 651
P G +GP
Sbjct: 465 PGGNPFARGP 474
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +2
Query: 407 GGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXP 538
GG GG P PP G GG G G PP P+ P G P
Sbjct: 616 GGPGG--PGGGGGPPRGPGGGGGGGPTG-PPAPPKPPAKPRGRP 656
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/88 (27%), Positives = 25/88 (28%)
Frame = +2
Query: 488 GSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKXXXXXXX 667
G+PPP P G P PP G P G P P P
Sbjct: 444 GAPPPGPPGAYPGNGAP-GGPPGGPPQFPGHPGMDPNYHYYQQHGMMPPHPGHPGYPPQH 502
Query: 668 XXXXXXXXXLSKNXPPPFXGGXXPPPGP 751
PP GG PPPGP
Sbjct: 503 MNAFSPGQYPGHQRPPGGPGG--PPPGP 528
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 730 GXXPPRAXKXPQGVXPPXKPXXGAPPXSXP 819
G PP A + P G PP G PP + P
Sbjct: 735 GYGPPGAMRPPAGFAPPPGAPYGYPPGAPP 764
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 546 GXTGXPXRXXGARGXGGGEPXXXPKTXPPXPXGG 445
G G P G G GGG P P PP P GG
Sbjct: 5 GGPGGPM--YGGAGGGGGGPPRGPPQQPPQPQGG 36
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 494 PPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAP 634
PPP PR P R P PPPR PP P + P P
Sbjct: 140 PPPPPRVP--RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +2
Query: 476 GXXXGSPPPXPRAPXXRXG---XPVXPPPRGXXXXPPK 580
G SPPP P R G P PPPR PP+
Sbjct: 116 GDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPR 153
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/90 (28%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Frame = -2
Query: 621 GPXXXRXFPGVXPHLG-----GXXXXPLGGGXTGX--PXRXXGARGXGGGEPXXXPKTXP 463
GP + PG+ + G G P G G P G G GG + K P
Sbjct: 190 GPPGLKGMPGIPGNQGEDAGPGRQGMPGPTGPPGPRGPPGETGDEGEGGPDGIPMEKKSP 249
Query: 462 PXPXGGXXXXXGKXPPXPPRXRXKKXXPXG 373
P P G G P P R K P G
Sbjct: 250 PGPR-GPPGPAGPDGPQGPEGRSGKQGPPG 278
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 371 PPXGXXFFXRXRGGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPP 550
PP G RGG G P PP GG G PP P P P P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG--GGMY--PPLIPTRPGPGGPPPNMAP 828
Query: 551 PR 556
PR
Sbjct: 829 PR 830
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 494 PPPXPR-APXXRXGXPVXPPPRGXXXXPPKWGXTP 595
P P PR AP G PPRG PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 371 PPXGXXFFXRXRGGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPP 550
PP G RGG G P PP GG G PP P P P P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG--GGMY--PPLIPTRPGPGGPPPNMAP 828
Query: 551 PR 556
PR
Sbjct: 829 PR 830
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 494 PPPXPR-APXXRXGXPVXPPPRGXXXXPPKWGXTP 595
P P PR AP G PPRG PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/86 (25%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +2
Query: 497 PPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGK-XLXXXGPXXAPXPXKXXXXXXXXX 673
PP P P G P P P G P + G TP + + GP P
Sbjct: 163 PPGPAGPP---GGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPG 219
Query: 674 XXXXXXXLSKNXPPPFXGGXXPPPGP 751
+++ P G PPGP
Sbjct: 220 NPGAPGQVTETPGTPGPAGAAGPPGP 245
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 532 GTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPXGPXPLKGPXXXL 663
G PP GG P GG P G G P GP GP L
Sbjct: 179 GMGGPPGHGGQGGPPGHGGMGGPPP-GQGGPGGPGGPGGPGGML 221
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 532 GTXXPPPQGGXXXSPQMGGXPXKXPXGXGXPXGPXPLKGPXXXL 663
G PP GG P GG P G G P GP GP L
Sbjct: 459 GMGGPPGHGGQGGPPGHGGMGGPPP-GQGGPGGPGGPGGPGGML 501
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +2
Query: 428 PXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXPPPRGXXXXPPKWGXTPGKXL 607
P PP G G PP P P G P PP G PP P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPP--PMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Query: 608 XXXGPXXAPXPXK 646
G AP P +
Sbjct: 119 PPSGLGVAPQPPR 131
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 494 PPPXPR-APXXRXGXPVXPPPRGXXXXPPKWGXTP 595
P P PR AP G PPRG PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 371 PPXGXXFFXRXRGGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXP 547
PP G RGG G P PP GG G P R P G P P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG---GGGMYPPLIPTRVPTPSNGAPEIP 828
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Frame = -2
Query: 597 PGVXPHLGGXXXXPLGGGXTGXPXRXX--GARGXGG-GEPXXXPKTXPPXPXGGXXXXXG 427
PG P G P G G P R G RG G G P K P P GG
Sbjct: 184 PG-QPGSKGNNGAPGAAGGPGQPGRPGKDGQRGKGSAGAPGAPGKAGPAGPAGGPGNNGS 242
Query: 426 KXPPXP 409
P P
Sbjct: 243 AGTPGP 248
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 7/85 (8%)
Frame = -2
Query: 639 GXGAXXGPXXXRXFPGVXPHLG-----GXXXXPLGGGXTGXPXRXXGARGXGG--GEPXX 481
G GP + PG G G P G +G P G G G GEP
Sbjct: 159 GPPGPAGPPGPKGLPGPQGDAGTSGQDGVPGLPGPPGPSG-PQGAPGVPGEKGPTGEPGK 217
Query: 480 XPKTXPPXPXGGXXXXXGKXPPXPP 406
PP P G + PP PP
Sbjct: 218 VINGAPPGPPGPPGPPGPQGPPGPP 242
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 494 PPPXPR-APXXRXGXPVXPPPRGXXXXPPKWGXTP 595
P P PR AP G PPRG PP G P
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 371 PPXGXXFFXRXRGGXGGXXPXXXXXPPXGXGGXVFGXXXGSPPPXPRAPXXRXGXPVXP 547
PP G RGG G P PP GG G P R P G P P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG---GGGMYPPLIPTRVPTPSNGAPEIP 828
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.4
Identities = 27/105 (25%), Positives = 31/105 (29%), Gaps = 12/105 (11%)
Frame = +2
Query: 488 GSPPPXPRA-PXXRXGXP-----VXPPPRGXXXXPPKWGXTPGKXLXXXGPXXAPXPXKX 649
G+PPP P P G PPP+G PP P P P
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 163
Query: 650 XXXXXXXXXXXXXXXLS------KNXPPPFXGGXXPPPGPXKXPR 766
LS + PPP G PPP P P+
Sbjct: 164 GTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQ 208
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 421 PPXPPPXPXKKXXXXGGG 368
PP PPP P GGG
Sbjct: 305 PPPPPPPPAPAPVSSGGG 322
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -1
Query: 451 GGXXXXXXXXPPXPPPXP 398
GG PP PPP P
Sbjct: 292 GGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 421 PPXPPPXPXKKXXXXGGG 368
PP PPP P GGG
Sbjct: 305 PPPPPPPPAPAPVSSGGG 322
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -1
Query: 451 GGXXXXXXXXPPXPPPXP 398
GG PP PPP P
Sbjct: 292 GGGYSAPAAAPPPPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,903
Number of Sequences: 27780
Number of extensions: 317410
Number of successful extensions: 2334
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1915
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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