Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_K02
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1524 + 27657711-27657768,27658612-27658671,27658805-276588...    29   4.7  
08_02_1525 + 27661094-27661801                                         29   6.2  
06_03_1060 - 27275799-27275957,27276017-27276187,27276372-272764...    29   6.2  
07_03_0557 + 19447367-19447517,19447630-19447730,19448359-194484...    28   8.3  

>08_02_1524 +
           27657711-27657768,27658612-27658671,27658805-27658890,
           27659343-27659963,27660460-27660618
          Length = 327

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +3

Query: 291 ILTSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEEEKSY 428
           I TSL  S   + + K I   KLS  +KAF+K++ ++ N E+ + Y
Sbjct: 233 ITTSLLESTM-HLLSKQIQMPKLSLISKAFQKKNPVICNEEQLQGY 277


>08_02_1525 + 27661094-27661801
          Length = 235

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +3

Query: 291 ILTSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEE 416
           I TSL +  + + + K I+  KLS  +KAF+K++ ++ N E+
Sbjct: 160 ITTSL-FESTIHLLSKQIAMPKLSLISKAFQKKNSVICNEEQ 200


>06_03_1060 -
           27275799-27275957,27276017-27276187,27276372-27276460,
           27277381-27277474
          Length = 170

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
 Frame = +3

Query: 291 ILTSLRYSDSGN--EIDKDISQEKLSGFAKAFEKQSQILENPEEEKSYTFASLLRNSKLM 464
           +L  L+Y+D+    +++ D +   ++  A+        +E PE   + +  +     + +
Sbjct: 32  VLKDLKYADTHEWVKVEGDSATIGVTDHAQDHLGDVVYVELPEVGSTVSQGTNFGAVESV 91

Query: 465 DLGDPVGKTVIGKIFHVVEDDLYIDFGWKFHCVCTRPNLRGEEYVRGTRVRIQIND-LEL 641
                +   V G+I  V  D+L    G+   C C    + G  Y +G  ++++I+D  EL
Sbjct: 92  KATSDINAPVSGEIIQV-NDELSEKPGFLTICFCNFTQINGSPYEKGWIIKVKISDPSEL 150

Query: 642 SS 647
           +S
Sbjct: 151 NS 152


>07_03_0557 +
           19447367-19447517,19447630-19447730,19448359-19448480,
           19448725-19448912,19449000-19449178,19449370-19449711,
           19449795-19449859,19450259-19450317,19450486-19450573,
           19450653-19450722,19450759-19450992,19451072-19451411,
           19451643-19451691,19452690-19452780,19453077-19453442
          Length = 814

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 339 DISQEKLSGFAKAFEKQSQILENPEE 416
           DIS+EKL    K +E    I+ +PEE
Sbjct: 522 DISKEKLDEICKVYETMEAIVTHPEE 547


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,557,850
Number of Sequences: 37544
Number of extensions: 328455
Number of successful extensions: 746
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)