Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_K02
         (854 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2724|AAF57671.2|  194|Drosophila melanogaster CG5497-PA...   149   5e-36
AY094907-1|AAM11260.1|  194|Drosophila melanogaster RH13070p pro...   146   3e-35
X04896-1|CAA28582.1|  741|Drosophila melanogaster bsg25D protein...    31   2.0  
AY095187-1|AAM12280.1| 1091|Drosophila melanogaster LD21844p pro...    31   2.0  
AE014134-903|AAN10537.2|  741|Drosophila melanogaster CG14025-PA...    31   2.0  
AE014134-902|AAN10536.1| 1032|Drosophila melanogaster CG14025-PC...    31   2.0  
AE014134-901|AAF52235.1| 1091|Drosophila melanogaster CG14025-PB...    31   2.0  
X03431-3|CAB57797.1|  471|Drosophila melanogaster protein ( Dros...    31   2.7  

>AE013599-2724|AAF57671.2|  194|Drosophila melanogaster CG5497-PA
           protein.
          Length = 194

 Score =  149 bits (361), Expect = 5e-36
 Identities = 70/109 (64%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
 Frame = +3

Query: 363 GFAKAFEKQSQILENPE-EEKSYTFASLLRNSKLMDLGDPVGKTVIGKIFHVVEDDLYID 539
           GFA+AF+K +     P+  E + TFASLLRNSKL+DL +  GK V GKIFHVV DDLYID
Sbjct: 58  GFARAFDKYTAPATPPQLPEDNQTFASLLRNSKLIDLDNAEGKVVSGKIFHVVGDDLYID 117

Query: 540 FGWKFHCVCTRPNLRGEEYVRGTRVRIQINDLELSSRFLGSSTDLTLLE 686
           FGWKFHCVC+RP     +YVRG RVR++I DLELS++FLGSS D+T+LE
Sbjct: 118 FGWKFHCVCSRPTRNASDYVRGARVRLRIKDLELSTKFLGSSKDITILE 166


>AY094907-1|AAM11260.1|  194|Drosophila melanogaster RH13070p
           protein.
          Length = 194

 Score =  146 bits (355), Expect = 3e-35
 Identities = 69/109 (63%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
 Frame = +3

Query: 363 GFAKAFEKQSQILENPE-EEKSYTFASLLRNSKLMDLGDPVGKTVIGKIFHVVEDDLYID 539
           GFA+AF+K +     P+  E + TFASLLRNSKL+DL +  GK V GKIFHVV DDLYID
Sbjct: 58  GFARAFDKYTAPATPPQLPEDNQTFASLLRNSKLIDLDNAEGKVVSGKIFHVVGDDLYID 117

Query: 540 FGWKFHCVCTRPNLRGEEYVRGTRVRIQINDLELSSRFLGSSTDLTLLE 686
           FGWKFHCVC+RP     +YVRG RVR++I DLELS++F GSS D+T+LE
Sbjct: 118 FGWKFHCVCSRPTRNASDYVRGARVRLRIKDLELSTKFQGSSKDITILE 166


>X04896-1|CAA28582.1|  741|Drosophila melanogaster bsg25D protein
           protein.
          Length = 741

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 297 TSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEEEKSYTFASLL 446
           TSL       E  +D  Q KLS   + FEK+ QI E+ + E    F  L+
Sbjct: 548 TSLEQMQRAYEDCEDYWQTKLSEERQLFEKERQIYEDEQHESDKKFTELM 597


>AY095187-1|AAM12280.1| 1091|Drosophila melanogaster LD21844p
           protein.
          Length = 1091

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 297 TSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEEEKSYTFASLL 446
           TSL       E  +D  Q KLS   + FEK+ QI E+ + E    F  L+
Sbjct: 635 TSLEQMQRAYEDCEDYWQTKLSEERQLFEKERQIYEDEQHESDKKFTELM 684


>AE014134-903|AAN10537.2|  741|Drosophila melanogaster CG14025-PA,
           isoform A protein.
          Length = 741

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 297 TSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEEEKSYTFASLL 446
           TSL       E  +D  Q KLS   + FEK+ QI E+ + E    F  L+
Sbjct: 548 TSLEQMQRAYEDCEDYWQTKLSEERQLFEKERQIYEDEQHESDKKFTELM 597


>AE014134-902|AAN10536.1| 1032|Drosophila melanogaster CG14025-PC,
           isoform C protein.
          Length = 1032

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 297 TSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEEEKSYTFASLL 446
           TSL       E  +D  Q KLS   + FEK+ QI E+ + E    F  L+
Sbjct: 576 TSLEQMQRAYEDCEDYWQTKLSEERQLFEKERQIYEDEQHESDKKFTELM 625


>AE014134-901|AAF52235.1| 1091|Drosophila melanogaster CG14025-PB,
           isoform B protein.
          Length = 1091

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 297 TSLRYSDSGNEIDKDISQEKLSGFAKAFEKQSQILENPEEEKSYTFASLL 446
           TSL       E  +D  Q KLS   + FEK+ QI E+ + E    F  L+
Sbjct: 635 TSLEQMQRAYEDCEDYWQTKLSEERQLFEKERQIYEDEQHESDKKFTELM 684


>X03431-3|CAB57797.1|  471|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 471

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 579 LRGEEYVRGTRVRIQINDLELSSRFLGSSTDLTLLEGRL*ITWYYIYSH 725
           + G + +R T+ +I+IN++  S   L    DLT L   L IT   I  H
Sbjct: 344 IEGNKMIRVTQCKIEINNINFSETLLEPEIDLTPLYTPLNITKIKIVKH 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,368,853
Number of Sequences: 53049
Number of extensions: 581546
Number of successful extensions: 1240
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)