Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J22
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 291 3e-79
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 291 3e-79
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 278 3e-75
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 278 3e-75
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 169 3e-42
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 155 5e-38
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 122 2e-28
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 120 2e-27
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 120 2e-27
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 119 2e-27
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 119 2e-27
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 117 1e-26
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 117 1e-26
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 115 4e-26
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 114 9e-26
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 111 6e-25
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 110 1e-24
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 107 7e-24
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 107 1e-23
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 107 1e-23
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 105 5e-23
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 100 1e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 100 1e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 100 1e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 100 3e-21
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 93 2e-19
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 93 2e-19
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 93 2e-19
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 93 2e-19
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 93 2e-19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 91 9e-19
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 89 3e-18
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 89 3e-18
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 89 3e-18
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 86 3e-17
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 86 3e-17
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 73 2e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 73 2e-13
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 72 5e-13
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 72 5e-13
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 1e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 36 0.036
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 36 0.048
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 36 0.048
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.19
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.26
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.45
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 3.1
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 3.1
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.5
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 29 5.5
U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 29 5.5
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 5.5
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 5.5
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 291 bits (715), Expect = 3e-79
Identities = 141/202 (69%), Positives = 168/202 (83%)
Frame = +1
Query: 184 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 363
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 364 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 543
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 544 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFX 723
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 724 MLSADVQVIXLSATMPDXVXXV 789
+ DVQV+ LSATMP V V
Sbjct: 198 SMPQDVQVVLLSATMPSEVLDV 219
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 291 bits (715), Expect = 3e-79
Identities = 141/202 (69%), Positives = 168/202 (83%)
Frame = +1
Query: 184 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 363
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 364 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 543
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 544 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFX 723
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 724 MLSADVQVIXLSATMPDXVXXV 789
+ DVQV+ LSATMP V V
Sbjct: 198 SMPQDVQVVLLSATMPSEVLDV 219
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 278 bits (682), Expect = 3e-75
Identities = 130/190 (68%), Positives = 158/190 (83%)
Frame = +1
Query: 211 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 390
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 391 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 570
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 571 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVI 750
G HVV GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D++ L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 751 XLSATMPDXV 780
LSAT+P +
Sbjct: 204 LLSATLPHEI 213
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 278 bits (682), Expect = 3e-75
Identities = 130/190 (68%), Positives = 158/190 (83%)
Frame = +1
Query: 211 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 390
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 391 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 570
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 571 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVI 750
G HVV GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D++ L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 751 XLSATMPDXV 780
LSAT+P +
Sbjct: 204 LLSATLPHEI 213
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 169 bits (410), Expect = 3e-42
Identities = 91/186 (48%), Positives = 120/186 (64%)
Frame = +1
Query: 232 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 411
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 412 SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 591
Q ++LAP R +AQ+ + + +LG +LN C+G E+ + HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMG 115
Query: 592 TPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMP 771
TP D ++ + IK+FVLDEADEMLS+GFKDQI++VF + DVQV+ LSATMP
Sbjct: 116 TP---KDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 772 DXVXXV 789
V V
Sbjct: 173 SEVLDV 178
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 155 bits (375), Expect = 5e-38
Identities = 82/233 (35%), Positives = 136/233 (58%)
Frame = +1
Query: 82 LIRLKEGQKNWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 261
++ G +NW + N P+KD+ T D + VE F+D L +LL G
Sbjct: 9 IVPANNGDENW-KAGLNLPAKDRRFK---------TADVTDTKGVE-FEDFCLGRDLLMG 57
Query: 262 IYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 441
I+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++I +++ QA+++
Sbjct: 58 IFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVI 117
Query: 442 APTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMIT 621
PTRELA Q ++ + L H+ K GGT++R+DI +L VH+V+ TPGR+ D++
Sbjct: 118 VPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLME 177
Query: 622 RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDXV 780
+ K VLDEAD++LS+ F+ + + L + QV+ SAT P+ V
Sbjct: 178 KGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTV 230
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 122 bits (295), Expect = 2e-28
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 15/201 (7%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 390
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 391 IL-----QQIDTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNA------KCHACI 528
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 529 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 708
GG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I
Sbjct: 308 GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEI 367
Query: 709 HDVFXMLSADVQVIXLSATMP 771
+F A Q + SATMP
Sbjct: 368 KSIFYFFKAQRQTLLFSATMP 388
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 120 bits (290), Expect = 1e-27
Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 402
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 403 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 576
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXMLSADVQVIX 753
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ M QV+
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 754 LSATMPDXVXXV 789
SAT+P + V
Sbjct: 223 FSATLPKELRTV 234
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 120 bits (290), Expect = 1e-27
Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 402
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 403 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 576
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXMLSADVQVIX 753
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ M QV+
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 754 LSATMPDXVXXV 789
SAT+P + V
Sbjct: 223 FSATLPKELRTV 234
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 120 bits (288), Expect = 2e-27
Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 4/225 (1%)
Frame = +1
Query: 118 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAI 297
E+S+ + S D P P + D + + F + + + + + + + +
Sbjct: 59 EESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQTMQIKTATPV 115
Query: 298 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 477
Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI +
Sbjct: 116 QAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAE 175
Query: 478 VVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR----ALHANT 645
ALG + KC +GG ++ R+L HVVV TPGR+ D+I A
Sbjct: 176 QFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKK 235
Query: 646 IKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDXV 780
I+ FVLDEAD ML + DQ+ +F +S Q + LSAT+ + +
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 120 bits (288), Expect = 2e-27
Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 4/225 (1%)
Frame = +1
Query: 118 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAI 297
E+S+ + S D P P + D + + F + + + + + + + +
Sbjct: 59 EESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQTMQIKTATPV 115
Query: 298 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 477
Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI +
Sbjct: 116 QAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAE 175
Query: 478 VVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR----ALHANT 645
ALG + KC +GG ++ R+L HVVV TPGR+ D+I A
Sbjct: 176 QFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKK 235
Query: 646 IKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDXV 780
I+ FVLDEAD ML + DQ+ +F +S Q + LSAT+ + +
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 119 bits (287), Expect = 2e-27
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 399
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 400 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 576
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXL 756
+++ TPGR+ +I L + ++ V DEAD + GF+DQ+ + + Q +
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 757 SATMP 771
SAT+P
Sbjct: 205 SATLP 209
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 119 bits (287), Expect = 2e-27
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 399
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 400 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 576
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXL 756
+++ TPGR+ +I L + ++ V DEAD + GF+DQ+ + + Q +
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 757 SATMP 771
SAT+P
Sbjct: 205 SATLP 209
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 117 bits (281), Expect = 1e-26
Identities = 62/192 (32%), Positives = 112/192 (58%), Gaps = 1/192 (0%)
Frame = +1
Query: 220 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 399
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 400 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 576
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXL 756
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 757 SATMPDXVXXVL 792
SAT P + +L
Sbjct: 202 SATYPRNLDNLL 213
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 117 bits (281), Expect = 1e-26
Identities = 62/192 (32%), Positives = 112/192 (58%), Gaps = 1/192 (0%)
Frame = +1
Query: 220 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 399
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 400 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 576
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXL 756
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 757 SATMPDXVXXVL 792
SAT P + +L
Sbjct: 202 SATYPRNLDNLL 213
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 115 bits (277), Expect = 4e-26
Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 402
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 403 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 576
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 577 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXL 756
H+VVGTPGR+ + L + +K FVLDE D+M+ G D DV + QV+
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDVQEI----KQVMMF 215
Query: 757 SATMPDXVXXV 789
SAT+P + V
Sbjct: 216 SATLPKELRTV 226
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 114 bits (274), Expect = 9e-26
Identities = 67/176 (38%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Frame = +1
Query: 271 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----- 432
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 433 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 612
L+L PTRELAQQ+Q+V I L K GG + R LE GV +VV TPGR+ D
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 613 MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDXV 780
+ + VLDEAD ML GF+ QI + + D Q + SAT P V
Sbjct: 266 FLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEV 321
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 113 bits (272), Expect = 1e-25
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Frame = +1
Query: 193 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 372
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 373 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 552
F+I +LQ + + L+L PTRELA QI + ALG + +GG ++
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQ 155
Query: 553 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXML 729
L H++V TPGR+ D + + + +K ++DEAD +L+ F+ ++ + ++
Sbjct: 156 AMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVI 215
Query: 730 SADVQVIXLSATMPDXV 780
+ + SATM V
Sbjct: 216 PRERRTYLFSATMTKKV 232
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 111 bits (267), Expect = 6e-25
Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Frame = +1
Query: 199 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 378
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 379 FSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 543
F + + + I + E A+ILAPTRELA Q K L K GG +
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGI 417
Query: 544 REDIRQLESGVHVVVGTPGRVYDMI---TRRALHANTIKLFVLDEADEMLSRGFKDQIHD 714
E I L+ G +VV TPGR+ D++ + + + + VLDEAD M +GF+ QI
Sbjct: 418 SEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMK 477
Query: 715 VFXMLSADVQVIXLSATMP 771
V + D Q + SAT P
Sbjct: 478 VVNNIRPDKQTVLFSATFP 496
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 110 bits (264), Expect = 1e-24
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 393
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 394 LQQIDTSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 543
L I TS+ + + A+I+APTRELAQQI++ G L K + IGG +
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASR 418
Query: 544 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 717
+ +L GV VV+ TPGR+ D++ R L N +LDEAD ML GF+ + V
Sbjct: 419 EDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKV 476
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 107 bits (258), Expect = 7e-24
Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 402
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 403 IDTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 570
+ + ALI++PTRELA Q + A+G H C IGG++V + R S
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRIS 196
Query: 571 GVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQV 747
G++++V TPGR+ + A + +++++ VLDEAD ML GF Q++ + L A+ Q
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQT 256
Query: 748 IXLSAT 765
+ SAT
Sbjct: 257 LLFSAT 262
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 107 bits (257), Expect = 1e-23
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 387
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 388 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 564
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 326
Query: 565 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFXML--- 729
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 327 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 386
Query: 730 SADVQVIXLSATMPDXV 780
S VQ + SAT + V
Sbjct: 387 SDSVQSMLFSATYDEPV 403
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 107 bits (257), Expect = 1e-23
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 387
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 388 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 564
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 351
Query: 565 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFXML--- 729
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 352 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 411
Query: 730 SADVQVIXLSATMPDXV 780
S VQ + SAT + V
Sbjct: 412 SDSVQSMLFSATYDEPV 428
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 107 bits (257), Expect = 1e-23
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 8/197 (4%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 387
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 388 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 564
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 735
Query: 565 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFXML--- 729
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 736 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 795
Query: 730 SADVQVIXLSATMPDXV 780
S VQ + SAT + V
Sbjct: 796 SDSVQSMLFSATYDEPV 812
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 107 bits (257), Expect = 1e-23
Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 30/259 (11%)
Frame = +1
Query: 94 KEGQKNWPEDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIY 267
KE + E K+G SK Q + D + G +LDT V +F+ MNL ++L+
Sbjct: 108 KETRDTVREKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACS 164
Query: 268 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALI 438
G+ P+ IQQ I + G+D+ A A +GTGKTA F + IL+++ + C + L+
Sbjct: 165 GAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLV 224
Query: 439 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 618
L PTRELA Q+ +V L + + C GG +++ L SG VVV TPGR+ D +
Sbjct: 225 LVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHL 284
Query: 619 -------------------------TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFX 723
+R+ ++ VLDEAD ML F+DQ++++
Sbjct: 285 HNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIR 344
Query: 724 MLSADVQVIXLSATMPDXV 780
+ + + Q + SATM + +
Sbjct: 345 LCAQNRQTLLFSATMTEEI 363
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 105 bits (251), Expect = 5e-23
Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 7/234 (2%)
Frame = +1
Query: 94 KEGQKNWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 273
K G+K K+ K Q + G P + D++ +TF D L E +L+ I
Sbjct: 50 KMGRKRKHRMKKSQAEKRQKLMESLVG--PQVDEMDFEPEHKTFADFGLDERILKSIGEL 107
Query: 274 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQA 432
G+EK + +Q+ I ++ ++++ +A++G+GKT F I ++Q++ D S+ A
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SA 166
Query: 433 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 612
+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 167 VIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLR 226
Query: 613 MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPD 774
M + R + + V+DEAD +LS G+++++ + L Q + SAT+ D
Sbjct: 227 MCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKD 280
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 100 bits (239), Expect = 1e-21
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 393
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 394 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 528
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 257
Query: 529 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 705
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ Q
Sbjct: 258 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 317
Query: 706 IHDV 717
I +
Sbjct: 318 IRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 100 bits (239), Expect = 1e-21
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 393
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 394 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 528
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 241
Query: 529 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 705
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ Q
Sbjct: 242 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 301
Query: 706 IHDV 717
I +
Sbjct: 302 IRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 100 bits (239), Expect = 1e-21
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Frame = +1
Query: 214 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 393
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 394 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 528
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 238
Query: 529 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 705
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ Q
Sbjct: 239 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 298
Query: 706 IHDV 717
I +
Sbjct: 299 IRKI 302
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 99.5 bits (237), Expect = 3e-21
Identities = 64/186 (34%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Frame = +1
Query: 274 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 429
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 430 ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTP 597
L+L+PTRELAQQI+ V N C+ GG + E + GV +V+ TP
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATP 220
Query: 598 GRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDX 777
GR+ D+ + ++ VLDEAD ML GF+ I + + D V SAT P+
Sbjct: 221 GRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEG 280
Query: 778 VXXVLD 795
V + D
Sbjct: 281 VRKLTD 286
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 93.5 bits (222), Expect = 2e-19
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Frame = +1
Query: 217 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 397 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 549
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 550 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXM 726
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 727 LS----ADVQVIXLSATMPDXV 780
S + Q + SAT PD V
Sbjct: 521 DSMPRKENRQTLMFSATFPDSV 542
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 93.5 bits (222), Expect = 2e-19
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Frame = +1
Query: 217 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 397 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 549
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 550 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXM 726
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 727 LS----ADVQVIXLSATMPDXV 780
S + Q + SAT PD V
Sbjct: 521 DSMPRKENRQTLMFSATFPDSV 542
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 93.5 bits (222), Expect = 2e-19
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Frame = +1
Query: 217 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 397 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 549
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 550 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXM 726
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 727 LS----ADVQVIXLSATMPDXV 780
S + Q + SAT PD V
Sbjct: 521 DSMPRKENRQTLMFSATFPDSV 542
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 93.5 bits (222), Expect = 2e-19
Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 22/216 (10%)
Frame = +1
Query: 199 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 375
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 376 TFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELAQQIQKVVIALGDHLN 507
F + +ILQ + S+ R+ Q AL+L+PTREL+ QI
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTP 278
Query: 508 AKCHACIGGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 684
GG N ++ I +L G H+++ TPGR+ D++ + + + VLDEAD ML
Sbjct: 279 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 338
Query: 685 SRGFKDQIHDVF---XMLSADVQVIXL-SATMPDXV 780
GF+ QI + M S + ++ + SAT P +
Sbjct: 339 DMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEI 374
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 93.1 bits (221), Expect = 2e-19
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Frame = +1
Query: 250 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 420
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 421 E-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 597
+I++PTREL+ Q V+ L + N +GG+N + +L GV ++V TP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 598 GRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSAT 765
GR+ D + T L N +K ++DEAD +L GF+ ++ V L Q + SAT
Sbjct: 199 GRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSAT 255
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 91.1 bits (216), Expect = 9e-19
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Frame = +1
Query: 220 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS----I 387
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 388 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 564
I+ Q D E A+I+ PTRELA Q+ + N GG + E +L
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
Query: 565 ES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADV 741
++ G +VV TPGR+ D++ A + V DEAD M GF+ Q+ + + D
Sbjct: 386 QNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDR 445
Query: 742 QVIXLSATMPDXVXXVL-DAL 801
Q + SAT V + DAL
Sbjct: 446 QCLMFSATFKQKVERLARDAL 466
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 89.4 bits (212), Expect = 3e-18
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Frame = +1
Query: 217 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 397 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 549
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 550 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXM 726
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 727 LS----ADVQVIXLSATMPDXV 780
S + Q + SAT PD V
Sbjct: 732 ESMPKKENRQTLMFSATFPDSV 753
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 89.4 bits (212), Expect = 3e-18
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Frame = +1
Query: 217 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 397 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 549
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 550 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXM 726
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 727 LS----ADVQVIXLSATMPDXV 780
S + Q + SAT PD V
Sbjct: 732 ESMPKKENRQTLMFSATFPDSV 753
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 89.4 bits (212), Expect = 3e-18
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Frame = +1
Query: 217 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 397 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 549
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 550 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFXM 726
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 727 LS----ADVQVIXLSATMPDXV 780
S + Q + SAT PD V
Sbjct: 732 ESMPKKENRQTLMFSATFPDSV 753
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 85.8 bits (203), Expect = 3e-17
Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Frame = +1
Query: 208 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 387
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 388 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 540
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 541 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 717
V + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +I +
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
Query: 718 F---XMLSADV-QVIXLSATMPDXV 780
M D Q + SAT P V
Sbjct: 475 INYKNMPKNDKRQTMMFSATFPSSV 499
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 85.8 bits (203), Expect = 3e-17
Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Frame = +1
Query: 208 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 387
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 388 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 540
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 541 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 717
V + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +I +
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
Query: 718 F---XMLSADV-QVIXLSATMPDXV 780
M D Q + SAT P V
Sbjct: 475 INYKNMPKNDKRQTMMFSATFPSSV 499
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 77.0 bits (181), Expect = 2e-14
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Frame = +1
Query: 334 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 504
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 505 NAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMI----TRRALHANTIKLFVLDE 669
N GG V ++I+ ++ V+++V TPGR++ +I T A T++L V+DE
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
Query: 670 ADEMLSRGFKDQIHDVFXMLSADVQVIXLSAT 765
AD F+D + ++ + + SAT
Sbjct: 168 ADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 74.1 bits (174), Expect = 1e-13
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 23/200 (11%)
Frame = +1
Query: 238 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI--- 405
L E+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 406 --------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIR 558
T +R +ALI+APTREL QI K + AL + +GG V+++
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERI 281
Query: 559 QLESGVHVVVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFX 723
+ +VV TPGR++ M+ +K V+DE D M+ G+ ++ +
Sbjct: 282 ISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILN 341
Query: 724 MLSAD-----VQVIXLSATM 768
+ + +Q + SAT+
Sbjct: 342 KIHEESEKEKLQTLVFSATL 361
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 2e-13
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Frame = +1
Query: 220 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 397 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 546
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 547 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 717
+++ L S ++++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI 915
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 2e-13
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Frame = +1
Query: 220 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 396
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 397 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 546
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 547 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 717
+++ L S ++++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI 915
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 72.1 bits (169), Expect = 5e-13
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Frame = +1
Query: 205 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 384
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 385 ISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 534
+ I+ +I +T + Q ALILAPTRELA QI + + + + G
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQ 496
Query: 535 TNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ--- 705
++ + ++ +G +++GT GR+ D + + ++ V DEAD +L KD
Sbjct: 497 SDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGH 556
Query: 706 ----IHDVFXMLSADV-QVIXLSATMPDXVXXVLDAL 801
I D M SA Q I SAT V V + L
Sbjct: 557 LGAIIKDAGFMESAATRQTIMTSATFNASVMTVANEL 593
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 72.1 bits (169), Expect = 5e-13
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Frame = +1
Query: 328 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 507
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 508 A---KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 678
+ +C G N+ + +R LE+G +VVGTP RV+D+I L ++ V+DE D+
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQ 369
Query: 679 MLS--RGFKDQIHDVFXML 729
L+ QI +F +L
Sbjct: 370 FLAGKNNCAHQIESIFRVL 388
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 223 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 399
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 68.9 bits (161), Expect = 4e-12
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 23/192 (11%)
Frame = +1
Query: 262 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 405
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 406 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 582
T +R +ALI+APTREL QI K + AL + +GG V+++ + +
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDI 122
Query: 583 VVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSAD--- 738
VV TPGR++ M+ +K V+DE D M+ G+ ++ + + +
Sbjct: 123 VVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEK 182
Query: 739 --VQVIXLSATM 768
+Q + SAT+
Sbjct: 183 EKLQTLVFSATL 194
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/115 (33%), Positives = 61/115 (53%)
Frame = +1
Query: 430 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 609
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 610 DMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPD 774
M + R + + V+DEAD +LS G+++++ + L Q + SAT+ D
Sbjct: 159 RMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKD 213
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 54.4 bits (125), Expect = 1e-07
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Frame = +1
Query: 211 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 390
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 391 ILQQI----------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 540
++ +I ++ + A++L PTRELA Q + L + I N
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ------TYTEFLKYCANTSISAAN 237
Query: 541 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML------SRGFKD 702
+ ++ ++V TP R+ + + + ++++ V+DE+D + + F++
Sbjct: 238 FSGEETDIQH-ADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRLFEVVEGQDKCFRN 294
Query: 703 QIHDVFXMLSAD-VQVIXLSATMPDXV 780
Q+ ++ A +V SAT V
Sbjct: 295 QLAAIYKACDAKCTRVAFFSATFSHEV 321
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 53.6 bits (123), Expect = 2e-07
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Frame = +1
Query: 286 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 462
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 463 QQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRR--- 627
QI D AK + G + ++ RQL S +V+V TP R+ +T +
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPP 261
Query: 628 ALHANTIKLFVLDEADEM 681
+ + ++ ++DEAD M
Sbjct: 262 PIDLSKLRFLIVDEADRM 279
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 35.9 bits (79), Expect = 0.036
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Frame = +1
Query: 289 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQA---LIL 441
+A+QQ++I R ++ A +G GKT F I ++ + T+I + LIL
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILIL 175
Query: 442 APTRELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 612
A T L +Q+ +V++ L D + I + + + + T G++
Sbjct: 176 ANTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKA 235
Query: 613 MITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFXMLSADV 741
I + + + +K+ +LDE+D+M+ F + I V L DV
Sbjct: 236 SIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQEDV 279
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 35.5 bits (78), Expect = 0.048
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +1
Query: 274 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 450
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 451 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 627
++A ++ + + G D++ + G +++ TP R +D I+RR
Sbjct: 1377 EDMATKVYADWKRRLEPAIGHTIVLLTGEQTM-DLKLAQRG-QLIISTPER-WDNISRRW 1433
Query: 628 --ALHANTIKLFVLDE 669
+KLF+ D+
Sbjct: 1434 KQRKSVQNVKLFIADD 1449
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 35.5 bits (78), Expect = 0.048
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Frame = +1
Query: 115 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 294
PE SK K S PP + G ++ V+ D++ K G GFEK +
Sbjct: 44 PEGSKRDTFKTHESVYVPPS-NKGDIEKIQHVYVKDMDELGQK-----GFK--GFEKLNV 95
Query: 295 IQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQI--------DTSIRECQALILAP 447
IQ + ++ ++ A +G GKT ++IL I D + + + +AP
Sbjct: 96 IQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAP 155
Query: 448 TRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR 627
+ LA ++ + L K G T + R + ++V TP + +D+ITR+
Sbjct: 156 MKALATEMTESFGKRLAPLGLKVKELTGDTQLS---RNEVADTQMLVLTPEK-WDVITRK 211
Query: 628 ALHANT----IKLFVLDEA----DE---MLSRGFKDQIHDVFXMLSADVQVIXLSATMPD 774
+ N+ ++L ++DE DE ++ + V M + ++++ LSAT+P+
Sbjct: 212 STSDNSLINVVRLLIIDEVHLLHDERGPVIETLVARTLRQV-EMSQSGIRIVGLSATLPN 270
Query: 775 XV 780
+
Sbjct: 271 FI 272
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 586 PPHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 494
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -2
Query: 715 HHGS-GP*NLWTTFHQLHQEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHGH 539
HHG G + H H E H +H ++H H E HH+P HGH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE-----HHHAPAH---HGH 576
Query: 538 WCHQCKHGI*HSSDHQ 491
H HG+ H H+
Sbjct: 577 HGHHGSHGV-HHGHHE 591
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 289 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ- 465
+A+QQ +I +GR ++ +A +G GKT F ++ I+ +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 466 QIQKVVIALGDHLNAKCHACIG 531
I AL D L +C +G
Sbjct: 174 LIMASTSALVDQLFNRCELILG 195
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 337 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 516
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 517 HA-CIGGTNVREDI 555
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 295 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ-QI 471
+QQ +I +GR ++ +A +G GKT F ++ I+ ++ Q+ T+ I
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 472 QKVVIALGDHLNAKCHACIG 531
AL D L +C +G
Sbjct: 76 MASTSALVDQLFNRCELILG 95
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.1
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 271 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 438
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 439 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 615
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 616 ITRRALHANTIKLFVLDEA 672
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.1
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +1
Query: 271 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 438
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 439 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 615
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 616 ITRRALHANTIKLFVLDEA 672
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 337 VIAQAQSGTGKTATFSISILQQIDTSIREC 426
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 607 YDMITRRALH---ANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDX 777
Y+ + R LH A + L L+ AD MLSR ++ V+ L DVQ I L +
Sbjct: 237 YEFMKARGLHDLDAISYMLESLNIADSMLSRDLNIRLSAVYVELWTDVQRIDLWEDIERT 296
Query: 778 VXXVLD 795
+ V+D
Sbjct: 297 LSGVVD 302
>U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical
protein F32A5.4a protein.
Length = 243
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 523 CIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 678
C G D RQL G V G G ++T L+AN I+L L +++
Sbjct: 10 CAVGVASHRDKRQLSIGTISVSGAGGSTGCVVTGNVLYANGIRLRNLTSSEQ 61
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 607 YDMITRRALH---ANTIKLFVLDEADEMLSRGFKDQIHDVFXMLSADVQVIXLSATMPDX 777
Y+ + R LH A + L L+ AD MLSR ++ V+ L DVQ I L +
Sbjct: 237 YEFMKARGLHDLDAISYMLESLNIADSMLSRDLNIRLSAVYVELWTDVQRIDLWEDIERT 296
Query: 778 VXXVLD 795
+ V+D
Sbjct: 297 LSGVVD 302
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +1
Query: 298 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 468
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 469 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 615
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +1
Query: 298 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 468
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 469 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 615
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 640 WHEAHDELSYHIHDLECPPPHEHHSPVGE 554
+H+AH + H CPPPH P+GE
Sbjct: 25 FHKAH--IDPHALAQTCPPPHGGEMPLGE 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,084,539
Number of Sequences: 27780
Number of extensions: 444615
Number of successful extensions: 1335
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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