Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J21
(985 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.007
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 30 0.050
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.062
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 2.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 5.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 9.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 9.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 518 PPPPXGGGGXXPXXPPPPPP 577
PPPP G G P PPPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 36.3 bits (80), Expect = 0.007
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 519 PPPPXGGGGXXXXPPPPPPPP 581
PPPP G PPPPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 35.5 bits (78), Expect = 0.012
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 519 PPPPXGGGGXXXXPPPPPPPP 581
PPPP G PPPPPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 34.7 bits (76), Expect = 0.020
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 520 PPPXGGGGGXAXXPPPPPPPP 582
PPP G A PPPPPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.027
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 560 GXXAXPPPPPXGGGXXFWXXPXPPPPPPP 474
G PPPPP G P PPPPPPP
Sbjct: 759 GGPPPPPPPPGVAG----AGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.035
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 559 GXXXXPPPPXGGGGXXFGXXPXPPPPPPP 473
G PPPP G G P PPPPPPP
Sbjct: 759 GGPPPPPPPPG----VAGAGPPPPPPPPP 783
Score = 33.5 bits (73), Expect = 0.047
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 503 PXKXXPPPPXGGGGXXPXXPPPPPPP 580
P PPPP G PPPPPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.1 bits (72), Expect = 0.062
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 507 PKXXPPPPXGGGGXXXXPPPPPP 575
P PPPP G PPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.082
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 520 PPPXGGGGGXAXXPPPPPPPPXXXXPG 600
PPP G PPPPPPPP G
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 498 GXXPKXXPPPPXGGGGXXXXPPPPP 572
G P PPP G G PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 520 PPPXGGGGGXAXXPPPPPPPP 582
PPP G A PPPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.44
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 519 PPPPXGGGGXXXXPPPPPPPP 581
PP P GG PPPPPPPP
Sbjct: 753 PPAPIMGG-----PPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.76
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 520 PPPXGGGGGXAXXPPPPPPPPXXXXPG 600
PPP GG PPPPPPPP G
Sbjct: 752 PPPAPIMGG----PPPPPPPPGVAGAG 774
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 545 PPPPPXGGGXXFWXXPXPPPPPP 477
PPP P GG P PPPPPP
Sbjct: 752 PPPAPIMGG------PPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 471 PGGGGGGGXGXXPKXXPPPPXGGGGXXXXPPPPPPPP 581
P G G G P PPP GG P P P
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 738 PPXAXXPXGXGGXXXXXXPPPPPPP 812
PP P G G PPPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPP--PPPPPPP 783
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -3
Query: 578 GGGGGGGXXAXPPPPPXGGGXXFWXXPXPPPPPPP 474
G G G PPPP G + P P P P
Sbjct: 769 GVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 6/31 (19%)
Frame = +3
Query: 507 PKXXPPPPXGGGGXXXXPPPP------PPPP 581
P PPP GG PPPP PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 544 PPPPXGGGGXXFGXXPXPPPPPPPG 470
PP P GG PPPPPPPG
Sbjct: 753 PPAPIMGG--------PPPPPPPPG 769
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 793 PPPPPPPXP 819
PPPPPPP P
Sbjct: 775 PPPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.007
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 503 PXKXXPPPPXGGGGXXPXXPPPPPPP 580
P PPPP G P PPPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 35.1 bits (77), Expect = 0.015
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -3
Query: 545 PPPPPXGGGXXFWXXPXPPPPPPPG 471
PPPPP G F PPPPPPPG
Sbjct: 11 PPPPPPG----FEPPSQPPPPPPPG 31
Score = 32.7 bits (71), Expect = 0.082
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 559 GXXXXPPPPXGGGGXXFGXXPXPPPPPPPG 470
G PPPP G F PPPPPPPG
Sbjct: 7 GNPPPPPPPPG-----FEPPSQPPPPPPPG 31
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 520 PPPXGGGGGXAXXPPPPPPPP 582
PPP G PPPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 498 GXXPKXXPPPPXGGGGXXXXPPPPPPP 578
G P PPP G PPPPPPP
Sbjct: 7 GNPPPPPPPP---GFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 559 PPPPPPPPXXXXP 597
PPPPPPPP P
Sbjct: 9 PPPPPPPPGFEPP 21
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 520 PPPXGGGGGXAXXPPPPPPPP 582
PPP G PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 30.3 bits (65), Expect = 0.44
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 511 KXXPPPXGGGGGXAXXPPPPPPPP 582
K P G PPPPPPPP
Sbjct: 291 KTQAPSSGDSANGGLPPPPPPPPP 314
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 508 GXXPXPPPPPPP 473
G P PPPPPPP
Sbjct: 303 GGLPPPPPPPPP 314
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 535 PXGGGGXXFGXXPXPPPPPP 476
P G G P PPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPPPP 314
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 510 KXXPPPPXGGGGXXXXPPPPPPPP 581
K P PPPPPPPP
Sbjct: 291 KTQAPSSGDSANGGLPPPPPPPPP 314
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 578 GGGGGGGXXAXPPPPPXGGGXXFWXXPXPPPP 483
G GG PPPPP FW P P
Sbjct: 298 GDSANGGLP--PPPPPPPPSNDFWKDSNEPAP 327
Score = 26.2 bits (55), Expect(2) = 0.050
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 793 PPPPPPPXP 819
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 25.8 bits (54), Expect(2) = 0.050
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 757 PXGGGGXXXXXXPPPPPPP 813
P G PPPPPPP
Sbjct: 295 PSSGDSANGGLPPPPPPPP 313
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.062
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 523 PPXGGGGGXAXXPPPPPPP 579
PP G G + PPPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
Score = 32.7 bits (71), Expect = 0.082
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 5/42 (11%)
Frame = +3
Query: 471 PGGGGGGGXGXXPKXXPPPPXGGGGXXXXPP-----PPPPPP 581
P G G P PPP G PP PPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = -3
Query: 572 GGGGGXXAXPPPPPXGGGXXFWXXPXPP-----PPPPP 474
G G + PPPPP P PP PPPPP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 3/39 (7%)
Frame = -1
Query: 580 GGGGGGGGXXXXPPPPXGGGGXXFGXXP---XPPPPPPP 473
G G PPPP P PPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 3/44 (6%)
Frame = -3
Query: 596 GXXXXGGGGGGGGXXAXPPPPPXGGGXXFWXXP---XPPPPPPP 474
G G G PPPP P PPPPPP
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 757 PXGGGGXXXXXXPPPPPPP 813
P G G PPPPPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPP 343
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 580 GGGGGGGGXXXXPPPPXGGGGXXFG 506
GGG GG G PPP GG FG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFG 211
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 581 GGGGGGGGXXAXPPPPPXGGG 519
GG GG GG PPP P G G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFG 208
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 477 GGGGGGXGXXPKXXPPPPXGGGG 545
GGG GG G PP P G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG 209
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 581 GGGGGGGGXXAXPPPPPXGGGXXF 510
GGG GG G + PPP GG F
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGF 210
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 596 GXXXXGGGGGGGGXXAXPPPPPXGGG 519
G G GG GGG PP P GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGG 209
Score = 22.2 bits (45), Expect(2) = 9.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 620 PXXXXXXPGXXXXGGGGGGGGXXAXPPPPPXGGG 519
P PG G GG GGG P GG
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 812 GGGGGGGXXXXXXPPPPXGXXXXXGXXPXG 723
GG GG G PP P G G G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEG 217
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = -3
Query: 560 GXXAXPPPPPXGGGXXFWXXPXPPPPPPPGXXXEXXXXXXXXXXXXXXXXGXXKXPXPPP 381
G P PP P PPPPPPP + + PPP
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP 275
Query: 380 P 378
P
Sbjct: 276 P 276
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 558 PPPPPPPP 581
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 559 PPPPPPPP 582
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 558 PPPPPPPP 581
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 559 PPPPPPPP 582
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 738 PPXAXXPXGXGGXXXXXXPPPPPPP 812
PP A P PPPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 500 PXPPPPPPP 474
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 499 PXPPPPPPP 473
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 793 PPPPPPPXP 819
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 550 AXXPPPPPPPPXXXXPG 600
A PPPPPPPP G
Sbjct: 943 AFPPPPPPPPPLVSAAG 959
Score = 27.5 bits (58), Expect = 3.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 542 GXXPXXPPPPPPP 580
G P PPPPPPP
Sbjct: 939 GVMPAFPPPPPPP 951
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 500 PXPPPPPPP 474
P PPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 499 PXPPPPPPP 473
P PPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 793 PPPPPPPXP 819
PPPPPPP P
Sbjct: 945 PPPPPPPPP 953
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 507 PKXXPPPPXGGGGXXXXPPPPPPP 578
P PP P G PPP P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 503 PXKXXPPPPXGGGGXXPXXPPPPPPP 580
P PP P G P PP PP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPP 1199
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 558 PPPPPPPP 581
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 559 PPPPPPPP 582
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 558 PPPPPPPP 581
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 559 PPPPPPPP 582
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 507 PKXXPPPPXGGGGXXXXPPPPPPPP 581
P PPP PP PPPP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.4 bits (48), Expect(2) = 9.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 499 PXPPPPPP 476
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 20.6 bits (41), Expect(2) = 9.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 493 PPPPPPP 473
PPPPP P
Sbjct: 6 PPPPPAP 12
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,150,210
Number of Sequences: 5004
Number of extensions: 42010
Number of successful extensions: 925
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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