Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_J19
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-3|CAB01876.1|  260|Caenorhabditis elegans Hypothetical pr...   132   4e-31
AF098995-12|AAC67485.1|  406|Caenorhabditis elegans Hypothetical...    29   3.3  
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    28   9.9  
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    28   9.9  
AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z79600-3|CAB01876.1|  260|Caenorhabditis elegans Hypothetical
           protein F59C6.5 protein.
          Length = 260

 Score =  132 bits (318), Expect = 4e-31
 Identities = 59/128 (46%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
 Frame = +1

Query: 202 YAETVVEP--NQKKYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDSEILSIL 375
           + ET+V+P  N+ + P+YH+   RVP ID+C  +D  C +EAN Q++ D+ VD  IL  L
Sbjct: 51  FRETIVQPLNNKNRLPYYHRQLTRVPEIDECGVNDKACFYEANEQYRLDKMVDGFILQTL 110

Query: 376 RQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGDLGAYGDARKAYMKQKHRMVWE 555
           RQR + CM+Y  PDH + C  + +  +  E  +F+KYG+LG   D R AYMKQKHRM+WE
Sbjct: 111 RQRVDRCMLYNNPDH-SPCAKVIEDMEENELNFFMKYGELGGESDVRDAYMKQKHRMIWE 169

Query: 556 RRNGPLSD 579
           RR+  + D
Sbjct: 170 RRHPEIMD 177


>AF098995-12|AAC67485.1|  406|Caenorhabditis elegans Hypothetical
           protein F58E1.12 protein.
          Length = 406

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 461 LRKLGSLNMVTSVLMVMREKLT*SRSIAWSGNDAMVPYQTLQSDQLKQ 604
           L +LGS+++ T +     E L   RS  W+GN A+      + +Q++Q
Sbjct: 74  LDQLGSVDLTTVLEQRPEEILVDGRSFRWNGNSAVKLKDQSECEQIRQ 121


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 496 GAYGDARKAYMKQKHRMVWERRNGPLSDLTK*SIKAVINSR 618
           GAYGD    Y   + + +W++  GP  D T       ++SR
Sbjct: 75  GAYGDVGSVYGIAQQKRIWQKPRGP--DATSEEFAHSVSSR 113


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 496 GAYGDARKAYMKQKHRMVWERRNGPLSDLTK*SIKAVINSR 618
           GAYGD    Y   + + +W++  GP  D T       ++SR
Sbjct: 243 GAYGDVGSVYGIAQQKRIWQKPRGP--DATSEEFAHSVSSR 281


>AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.11 protein.
          Length = 788

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
 Frame = +1

Query: 334 KRDRAVDSEILSILRQRYEDCMMYEQPDHAT-----KCRSLWDKYKSAEEAWFIKYGDLG 498
           +++  ++ ++ ++L Q   +C +Y+    +      + R   D YK   E  F K+GDL 
Sbjct: 541 EQNEGLEEKVENVLAQYRSECELYQNSVSSLQMDRDRLRKDVDLYKGKAEILFTKFGDLV 600

Query: 499 AYGD--ARKAYMK 531
              D   +KA+ K
Sbjct: 601 KTNDELEKKAHQK 613


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,070,691
Number of Sequences: 27780
Number of extensions: 298237
Number of successful extensions: 703
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)