Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_J17
         (921 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    32   1.3  
AE014298-609|AAF45927.1| 1357|Drosophila melanogaster CG15570-PA...    32   1.3  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    32   1.3  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    32   1.3  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    29   6.8  

>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p
           protein.
          Length = 846

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 653 EPGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPK 781
           EP   P    +   PP +   ++ PP  A P    PP  APPK
Sbjct: 197 EPPPPPAPAEVEPPPPPAPTELEPPPPPAPPKVELPPPPAPPK 239



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
 Frame = +2

Query: 653 EPGXXPGXNXLTKXPPXSQEPVKRPPXLAXP--HXXRPPXRAPP 778
           EP   P    L   PP +   +K PP  A P      PP  APP
Sbjct: 138 EPPPPPAPPTLVPPPPPAPPTIKPPPPPAPPTVEPPPPPPPAPP 181



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +2

Query: 656 PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPK 781
           P   P    +   PP +   V+ PP  A      PP  APPK
Sbjct: 187 PPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPPPPPAPPK 228


>AE014298-609|AAF45927.1| 1357|Drosophila melanogaster CG15570-PA
            protein.
          Length = 1357

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 647  PTE-PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPP 778
            PT+ P   P     T  PP +Q P  +PP +  P   +PP   PP
Sbjct: 1244 PTQSPTETPTYGPPTNEPPTNQPPTNQPPTVQPP-TNQPPTNQPP 1287


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
           isoform A protein.
          Length = 1109

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 653 EPGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPK 781
           EP   P    +   PP +   ++ PP  A P    PP  APPK
Sbjct: 460 EPPPPPAPAEVEPPPPPAPTELEPPPPPAPPKVELPPPPAPPK 502



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
 Frame = +2

Query: 653 EPGXXPGXNXLTKXPPXSQEPVKRPPXLAXP--HXXRPPXRAPP 778
           EP   P    L   PP +   +K PP  A P      PP  APP
Sbjct: 401 EPPPPPAPPTLVPPPPPAPPTIKPPPPPAPPTVEPPPPPPPAPP 444



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +2

Query: 656 PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPK 781
           P   P    +   PP +   V+ PP  A      PP  APPK
Sbjct: 450 PPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPPPPPAPPK 491


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
           isoform B protein.
          Length = 1150

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 653 EPGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPK 781
           EP   P    +   PP +   ++ PP  A P    PP  APPK
Sbjct: 460 EPPPPPAPAEVEPPPPPAPTELEPPPPPAPPKVELPPPPAPPK 502



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
 Frame = +2

Query: 653 EPGXXPGXNXLTKXPPXSQEPVKRPPXLAXP--HXXRPPXRAPP 778
           EP   P    L   PP +   +K PP  A P      PP  APP
Sbjct: 401 EPPPPPAPPTLVPPPPPAPPTIKPPPPPAPPTVEPPPPPPPAPP 444



 Score = 29.1 bits (62), Expect = 9.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +2

Query: 656 PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPK 781
           P   P    +   PP +   V+ PP  A      PP  APPK
Sbjct: 450 PPPPPAPTKVEPPPPPAPAEVEPPPPPAPTELEPPPPPAPPK 491


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 18/63 (28%), Positives = 20/63 (31%)
 Frame = +2

Query: 629 KXVXRXPTEPGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPKTXXXXRGGX 808
           K   R PT     P        PP ++ P K P     P   R     PP T    R   
Sbjct: 618 KPPTRPPTTYLPPPSVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPT 677

Query: 809 NPP 817
            PP
Sbjct: 678 YPP 680


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,338,295
Number of Sequences: 53049
Number of extensions: 280629
Number of successful extensions: 1012
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)