Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J17
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.2
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 695 PPXSQEPVKRPPXLAXPHXXRPPXRAPP 778
PP SQ PV +PP ++ P +PP PP
Sbjct: 475 PPVSQPPVSQPP-VSQPPVSQPPVSQPP 501
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 695 PPXSQEPVKRPPXLAXPHXXRPPXRAPP 778
PP SQ PV +PP ++ P +PP PP
Sbjct: 480 PPVSQPPVSQPP-VSQPPVSQPPVSQPP 506
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 695 PPXSQEPVKRPPXLAXPHXXRPPXRAPPKT 784
PP SQ PV +PP ++ P +PP P T
Sbjct: 485 PPVSQPPVSQPP-VSQPPVSQPPVPQHPMT 513
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 695 PPXSQEPVKRPPXLAXPHXXRPPXRAPP 778
PP SQ PV +PP ++ P +PP PP
Sbjct: 539 PPVSQPPVSQPP-VSQPPVSQPPVSQPP 565
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 695 PPXSQEPVKRPPXLAXPHXXRPPXRAPP 778
PP SQ PV +PP ++ P +PP PP
Sbjct: 544 PPVSQPPVSQPP-VSQPPVSQPPVSQPP 570
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 695 PPXSQEPVKRPPXLAXPHXXRPPXRAPPKT 784
PP SQ PV +PP ++ P +PP P T
Sbjct: 549 PPVSQPPVSQPP-VSQPPVSQPPVPQHPMT 577
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 626 PKXVXRXPTEPGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPKT 784
PK P P K P EP K P P PP PPKT
Sbjct: 368 PKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKT 420
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 656 PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPKTXXXXRGGXNPP 817
P PG +T PP P PP P PP PP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP-----ISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 656 PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPKTXXXXRGGXNPP 817
P PG +T PP P PP P PP PP GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP-----ISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 656 PGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPKTXXXXRGGXNPP 817
P PG +T PP P PP P PP PP GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP-----ISGGPPPP 344
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +2
Query: 647 PTEPGXXPGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPPKT 784
P +P P + P P +RPP P RPP P T
Sbjct: 231 PVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPT 276
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 668 PGXNXLTKXPPXSQEPVKRPPXLAXPHXXRPPXRAPP 778
P + + PP P +RPP + P R P R PP
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPP-MTPPSPQRRPPRTPP 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,330,633
Number of Sequences: 27780
Number of extensions: 137315
Number of successful extensions: 386
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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