Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J14
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 64 2e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 64 2e-10
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 62 4e-10
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 59 3e-09
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 58 8e-09
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 58 8e-09
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 58 8e-09
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 58 1e-08
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 58 1e-08
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 57 1e-08
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 57 1e-08
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 57 1e-08
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 57 1e-08
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 57 2e-08
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 56 3e-08
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 56 4e-08
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 56 4e-08
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 55 6e-08
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 55 6e-08
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 55 6e-08
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 55 6e-08
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 55 6e-08
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 53 2e-07
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 53 2e-07
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 52 4e-07
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 52 7e-07
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 52 7e-07
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 48 9e-06
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 36 0.028
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 31 1.4
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 31 1.4
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 30 2.4
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 2.4
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 29 4.2
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 29 4.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.8
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 28 9.8
U28738-12|AAK68400.1| 189|Caenorhabditis elegans Sr protein (sp... 28 9.8
AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 28 9.8
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 28 9.8
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/86 (32%), Positives = 45/86 (52%)
Frame = +2
Query: 311 HLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFV 490
H V + + ++ V++DV F PEE+ V D +++ + R FV
Sbjct: 42 HRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFV 101
Query: 491 RRYALPEGAAPETVESRLSSDGVLTI 568
R+Y LP G PE ++S LS++GVLT+
Sbjct: 102 RKYNLPTGVRPEQIKSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/86 (32%), Positives = 45/86 (52%)
Frame = +2
Query: 311 HLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFV 490
H V + + ++ V++DV F PEE+ V D +++ + R FV
Sbjct: 41 HRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFV 100
Query: 491 RRYALPEGAAPETVESRLSSDGVLTI 568
R+Y LP G PE ++S LS++GVLT+
Sbjct: 101 RKYNLPTGVRPEQIKSELSNNGVLTV 126
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +2
Query: 347 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 526
K+KF+V LDVQ F+P+EI VK + +++ ++R+ R Y LP+
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVS 90
Query: 527 TVESRLSSDGVLTITAPRK 583
TV+S L++ GVLTITA +K
Sbjct: 91 TVKSHLATRGVLTITASKK 109
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 59.3 bits (137), Expect = 3e-09
Identities = 35/109 (32%), Positives = 52/109 (47%)
Frame = +2
Query: 296 DNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYI 475
D++ + + I D+ KF V LDV HF PE + +K DG + Y+
Sbjct: 34 DHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYL 92
Query: 476 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
R F + LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 93 KRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 58.0 bits (134), Expect = 8e-09
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 658
E V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 145
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 58.0 bits (134), Expect = 8e-09
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 658
E V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 145
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 58.0 bits (134), Expect = 8e-09
Identities = 37/110 (33%), Positives = 55/110 (50%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 658
E V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 145
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +2
Query: 350 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 529
+KF+V LD F P +I VK I++ ++R+ R Y LPE P T
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPST 91
Query: 530 VESRLSSDGVLTITA 574
V S L+S GVLTITA
Sbjct: 92 VRSHLNSSGVLTITA 106
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/112 (33%), Positives = 55/112 (49%)
Frame = +2
Query: 323 SXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 502
S I + KF +NL+V F PE++ + DG+ + Y + F R
Sbjct: 40 SSEQIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVIL 98
Query: 503 LPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKD 658
LPE V S LS DG L+I AP+K +A++G R +PI Q PV ++ +
Sbjct: 99 LPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPI-QQAPVEQKTSE 146
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +2
Query: 344 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 523
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 62
Query: 524 ETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
+V+S +S++G L I AP+K R +PI
Sbjct: 63 PSVKSAISNEGKLQIEAPKK----TNSSRSIPI 91
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/109 (31%), Positives = 53/109 (48%)
Frame = +2
Query: 251 PSPVQCSPKTTSDRGDNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIV 430
PS + T DN + L+ S D ++ DV ++ PEE++VKT D ++
Sbjct: 94 PSDLMAHRPTYDPYLDNLKSPLIKDES----DGKTLRLRFDVANYKPEEVTVKTIDNRLL 149
Query: 431 VXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAP 577
V + R++ + + LP G PE + S LS+DGVLT+ AP
Sbjct: 150 VHAKHEEKTPQRT-VFREYNQEFLLPRGTNPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/109 (31%), Positives = 53/109 (48%)
Frame = +2
Query: 251 PSPVQCSPKTTSDRGDNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIV 430
PS + T DN + L+ S D ++ DV ++ PEE++VKT D ++
Sbjct: 108 PSDLMAHRPTYDPYLDNLKSPLIKDES----DGKTLRLRFDVANYKPEEVTVKTIDNRLL 163
Query: 431 VXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAP 577
V + R++ + + LP G PE + S LS+DGVLT+ AP
Sbjct: 164 VHAKHEEKTPQRT-VFREYNQEFLLPRGTNPEQISSTLSTDGVLTVEAP 211
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +2
Query: 344 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 523
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 51 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 109
Query: 524 ETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
+V+S +S++G L I AP+K R +PI
Sbjct: 110 PSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 338 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 517
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 80
Query: 518 APETVESRLSSDGVLTITAP 577
PE + S LS+DGVLT+ AP
Sbjct: 81 NPEQISSTLSTDGVLTVEAP 100
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/98 (32%), Positives = 47/98 (47%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
+SI+ F LDV + + + V D I+V I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
+ APE+V+S+L++DG LTI A P +G R + I
Sbjct: 132 KAVAPESVQSQLTADGHLTIDAKAPEPKQ-EGARPIQI 168
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
S I + KF +NL+V F PE++ + DG + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLP 99
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 628
E V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
S I + KF +NL+V F PE++ + DG + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLP 99
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 628
E V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/109 (30%), Positives = 51/109 (46%)
Frame = +2
Query: 296 DNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYI 475
D++ + + I D+ KF V LDV HF PE++ ++ DG + Y
Sbjct: 26 DHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYS 84
Query: 476 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 85 KRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/109 (30%), Positives = 51/109 (46%)
Frame = +2
Query: 296 DNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYI 475
D++ + + I D+ KF V LDV HF PE++ ++ DG + Y
Sbjct: 34 DHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYS 92
Query: 476 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 93 KRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/109 (30%), Positives = 51/109 (46%)
Frame = +2
Query: 296 DNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYI 475
D++ + + I D+ KF V LDV HF PE++ ++ DG + Y
Sbjct: 34 DHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYS 92
Query: 476 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 93 KRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
S++ D +F V++D F PEEI VKT D +++ + FVR+Y LP
Sbjct: 105 SNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLP 164
Query: 509 EGAAPETVESRLSSDGVLTITAPRKVPDAVKG-ERKVPIAQTG 634
+++S + + G L + A + A++G ER +PI G
Sbjct: 165 RDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 55.2 bits (127), Expect = 6e-08
Identities = 33/109 (30%), Positives = 51/109 (46%)
Frame = +2
Query: 296 DNSRLHLVTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYI 475
D++ + + I D+ KF V LDV HF PE++ ++ DG + Y
Sbjct: 34 DHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYS 92
Query: 476 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
R F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 93 KRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +2
Query: 347 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 526
+D F+V L+ +F P EI VK ++ + I+R R Y LP+G P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 527 TVESRLSSDGVLTITAPRK 583
T++S+L G+L I+ +K
Sbjct: 90 TIKSKLDGSGILHISGNKK 108
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/93 (33%), Positives = 45/93 (48%)
Frame = +2
Query: 344 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 523
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 51 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 109
Query: 524 ETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 622
+V+S +S++G L I AP+K R +PI
Sbjct: 110 TSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +2
Query: 356 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 535
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 536 SRLSSDGVLTITAPRK 583
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +2
Query: 356 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 535
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 536 SRLSSDGVLTITAPRK 583
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 350 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 520
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 521 PETVESRLSSDGVLTITA 574
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 51.6 bits (118), Expect = 7e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 350 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 520
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 521 PETVESRLSSDGVLTITA 574
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 48.8 bits (111), Expect = 5e-06
Identities = 35/104 (33%), Positives = 49/104 (47%)
Frame = +2
Query: 317 VTSXSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRR 496
+T S I DKF VNL+V +F PEE+ V +G + + F R
Sbjct: 39 MTDDSEIMNSNDKFAVNLNVSNFKPEELKV-NLEGRQLSIQGEHDVENEHGASRKSFSRM 97
Query: 497 YALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 628
LPE +V + LS+DG L I AP+ + V G R VP+ +
Sbjct: 98 ILLPEDVDITSVATNLSNDGKLCIEAPKL--EGVCG-RSVPVKE 138
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 344 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 523
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 524 ETVESRLSSDGVLTITA 574
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 344 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 523
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 524 ETVESRLSSDGVLTITA 574
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 329 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 508
+ ++ KF V LDV F PEE+ V +G+++ + R F R++ LP
Sbjct: 44 NEVENTAQKFCVKLDVAAFKPEELKVNL-EGHVLTIEGHHEVKTEHGFSKRSFTRQFTLP 102
Query: 509 EGAAPETVESRLSSDGVLTITAPR 580
+ + + ++ +G +TI AP+
Sbjct: 103 KDVDLAHIHTVINKEGQMTIDAPK 126
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 350 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 529
+KF VNL+V PEE+ + + + ++ + + LPE
Sbjct: 49 EKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPEDVDVTH 108
Query: 530 VESRLSSDGVLTITAPR 580
+ S LS DG L I P+
Sbjct: 109 LSSNLSEDGKLLIEVPK 125
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 435 KASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGRYPTPSRE--R 608
++ + RR++ T + S S + + R R +R S R P+P R+ R
Sbjct: 90 RSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRDLKR 149
Query: 609 ERCPSHRPVPFARRSRTRAREP 674
E S P+P RSRTR+ P
Sbjct: 150 EASRSRSPLPAKDRSRTRSGSP 171
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/94 (32%), Positives = 45/94 (47%)
Frame = +3
Query: 390 RKRFR*RLPTGTSWWKASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPS 569
R + R R P ++ ++ +K RK+S+ + S D R + R R +R S
Sbjct: 23 RSQSRQRSPARSNRSRSRSKDRKSSSRRSRSRSRD-RRGDRGDRRRSRSR-------SKD 74
Query: 570 PRRGRYPTPSRERERCPSHRPVPFARRSRTRARE 671
R R +PSRER R S RRSRTR+R+
Sbjct: 75 RRTTRRRSPSRERRRSRSRDRGAPRRRSRTRSRD 108
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 561 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRT 659
SPSPRR R P+P ++++R +R P ARR R+
Sbjct: 355 SPSPRRRRSPSPKKDKKR--DYRREP-ARRRRS 384
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 550 RRGSHHHRAEEGTRRRQGREK-GAHR-TDRSRSQGDQGPER 666
RR S +HR + + R R++ HR +DR R + D+ P+R
Sbjct: 382 RRSSDNHRDRDRSYRDNNRDRRDNHRDSDRDRRRHDRSPDR 422
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 561 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRT 659
SPSPRR R P+P ++++R +R P ARR R+
Sbjct: 355 SPSPRRRRSPSPKKDKKR--DYRREP-ARRRRS 384
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 550 RRGSHHHRAEEGTRRRQGREK-GAHR-TDRSRSQGDQGPER 666
RR S +HR + + R R++ HR +DR R + D+ P+R
Sbjct: 382 RRSSDNHRDRDRSYRDNNRDRRDNHRDSDRDRRRHDRSPDR 422
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 561 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRT 659
SPSPRR R P+P ++++R +R P ARR R+
Sbjct: 286 SPSPRRRRSPSPKKDKKR--DYRREP-ARRRRS 315
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 550 RRGSHHHRAEEGTRRRQGREK-GAHR-TDRSRSQGDQGPER 666
RR S +HR + + R R++ HR +DR R + D+ P+R
Sbjct: 313 RRSSDNHRDRDRSYRDNNRDRRDNHRDSDRDRRRHDRSPDR 353
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 547 IRRGSHHHRAEEGTRRRQGREKGAHRTDRSRSQGDQGPERGNQDAENK 690
I+ S H R + RR+ R + +R + ++ ++ +DAE+K
Sbjct: 577 IKASSSHRRDRDDARRKDRRRDDVRKKERREKREEEDDDQKTKDAESK 624
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 344 DKDKFQVNLDVQHFSPEE 397
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 567 SPRRGRYPTPSRERE-RCPSHRPVPFARRSRT---RAREPGCRK 686
SPRR R P+P R+R+ R PS P P R S + R R P K
Sbjct: 488 SPRRRRSPSPERQRKRRSPSDSP-PTRRLSTSPIRRRRSPSPNK 530
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 567 SPRRGRYPTPSRERE-RCPSHRPVPFARRSRT---RAREPGCRK 686
SPRR R P+P R+R+ R PS P P R S + R R P K
Sbjct: 488 SPRRRRSPSPERQRKRRSPSDSP-PTRRLSTSPIRRRRSPSPNK 530
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 561 SPSPRRGRYPTPSRERERCPSHRPVPFARRSRTRAREP 674
SPS + R P R P R P RRS R R P
Sbjct: 469 SPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSP 506
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 615 TFLSPLTASGTFLGAVMVRTPSDDSRDS 532
T P T F+G RTP+DD DS
Sbjct: 514 TMTQPYTGLNAFVGTPKSRTPTDDDYDS 541
>U28738-12|AAK68400.1| 189|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform c protein.
Length = 189
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 510 KARRLRLW-NRGCHQTGFSPSPRRGRYPT--PSRERERCPSHRPVPFARRSRTRAREP 674
+AR+ LW N FS SP + P +RE S P+P RSRTR+ P
Sbjct: 95 RARKETLWVNYQYISIHFSFSPHSYQKPLFRLKEKREASRSRSPLPAKDRSRTRSGSP 152
>AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical
protein Y66D12A.23 protein.
Length = 448
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -2
Query: 709 PLQNHPTYFRHPGSLALVLDLLANGTGLCDGHLSLSLDGVGYLPRRGDG 563
P+ P Y G L L DLL G G G SL L RRG G
Sbjct: 321 PVGQKPFYMARDGQLTLSFDLLVPGIGELAGG-SLREQSAEELQRRGCG 368
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 510 KARRLRLWNRGCHQTGFSPSPRRGRYPTPSRERERCPSHRPVPFARRSRTRAREP 674
+ + R +RG T +PS Y P +ER SHRP RR R P
Sbjct: 637 RVEKSRYLSRGV-STPHTPSEVHIPYNNPEKERAYQQSHRPSSPKRRPSGRTNSP 690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,562,807
Number of Sequences: 27780
Number of extensions: 377622
Number of successful extensions: 1327
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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