Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J12
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution ge... 157 7e-38
AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution pr... 157 7e-38
AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution pr... 157 7e-38
AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein. 157 7e-38
AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein. 157 7e-38
AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution ge... 107 4e-23
AB019408-1|BAA76628.1| 158|Homo sapiens protein ( Homo sapiens ... 93 1e-18
AF241788-1|AAG44476.1| 211|Homo sapiens NPD011 protein. 89 2e-17
AL356390-6|CAI13560.1| 133|Homo sapiens nuclear distribution ge... 70 1e-11
BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing ... 54 7e-07
AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein. 52 4e-06
BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein. 38 0.051
BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing ... 38 0.051
AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens ... 38 0.051
AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein. 38 0.051
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ... 34 0.82
BC022260-1|AAH22260.1| 400|Homo sapiens Unknown (protein for IM... 34 0.82
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr... 34 0.82
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein. 34 0.82
AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation ... 34 0.82
AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein. 34 0.82
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein. 34 0.82
AL603966-1|CAI12334.1| 95|Homo sapiens family with sequence si... 33 1.1
AL591684-3|CAH72202.1| 95|Homo sapiens family with sequence si... 33 1.1
AL391137-3|CAI12205.1| 95|Homo sapiens family with sequence si... 33 1.1
AL136982-4|CAI17119.1| 95|Homo sapiens family with sequence si... 33 1.1
U00802-1|AAA16256.1| 649|Homo sapiens drebrin E2 protein. 33 1.4
D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein. 33 1.4
D17530-1|BAA04480.1| 649|Homo sapiens drebrin E protein. 33 1.4
BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type)... 33 1.4
BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type)... 33 1.4
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 33 1.4
BC007567-1|AAH07567.1| 649|Homo sapiens drebrin 1 protein. 33 1.4
BC007281-1|AAH07281.1| 649|Homo sapiens drebrin 1 protein. 33 1.4
BC000283-1|AAH00283.1| 649|Homo sapiens drebrin 1 protein. 33 1.4
AL110225-1|CAB53683.1| 651|Homo sapiens hypothetical protein pr... 33 1.4
M83216-2|AAA58420.1| 538|Homo sapiens caldesmon protein. 32 2.5
M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein. 32 2.5
M64110-1|AAA35636.1| 538|Homo sapiens caldesmon protein. 32 2.5
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 32 2.5
D90453-1|BAA14419.1| 532|Homo sapiens l-caldesmon II protein. 32 2.5
D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein. 32 2.5
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 32 2.5
BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein. 32 2.5
BC040354-1|AAH40354.1| 538|Homo sapiens caldesmon 1 protein. 32 2.5
AF247820-1|AAF69498.3| 481|Homo sapiens NAG22 protein protein. 32 2.5
U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein. 32 3.3
D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein. 32 3.3
BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein. 32 3.3
BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein. 32 3.3
AL645617-2|CAI16756.1| 579|Homo sapiens UPF2 regulator of nonse... 32 3.3
AL138898-5|CAH73459.1| 579|Homo sapiens UPF2 regulator of nonse... 32 3.3
AK096191-1|BAC04721.1| 579|Homo sapiens protein ( Homo sapiens ... 32 3.3
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 4.4
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 4.4
BC090919-1|AAH90919.1| 109|Homo sapiens UPF2 protein protein. 31 4.4
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 31 4.4
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 4.4
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 4.4
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 31 4.4
AF301222-1|AAG39935.1| 138|Homo sapiens unknown protein. 31 4.4
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 31 4.4
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 31 4.4
>BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution
protein C homolog protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution
protein protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein.
Length = 331
Score = 157 bits (380), Expect = 7e-38
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 6/209 (2%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMAQQHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAQQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXX 537
+ R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKD 124
Query: 538 XXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEI 705
GS DS + EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++
Sbjct: 125 AENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDL 183
Query: 706 RVP--LRQILRPRDLTVVINKKHLKVGIK 786
VP + L+ +D+ V I ++HL+VG+K
Sbjct: 184 AVPFCVNFRLKGKDMVVDIQRRHLRVGLK 212
>AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 209
Score = 107 bits (258), Expect = 4e-23
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Frame = +1
Query: 244 LLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEI 423
L+NT SFL RKTDFF GG EG E+++ TF +H + + R K+ ++EA++R K
Sbjct: 32 LVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQLAQKTRREKRARQEAERREKAE 90
Query: 424 QQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXXXXXV----GSGDSSDVTEPA 591
+ + + ++ + ELTD+ GS DS +
Sbjct: 91 RAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTE 150
Query: 592 TPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVP--LRQILRPRDLTVVINKK 765
EE+D+ K+KGKLKPN GNG DL +Y+WTQTL E+++ VP + L+ +D+ V I ++
Sbjct: 151 EDEEEDE-KDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR 209
>AB019408-1|BAA76628.1| 158|Homo sapiens protein ( Homo sapiens
mRNA, expressed in fibroblasts of periodontal ligament,
complete cds, clone:PDL-48. ).
Length = 158
Score = 93.1 bits (221), Expect = 1e-18
Identities = 46/106 (43%), Positives = 67/106 (63%)
Frame = +1
Query: 178 DPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKK 357
+ ERFD MLLAMA QHEGGV++L+NT SFL RKTDFF GG EG E+++ TF +H +
Sbjct: 6 EEERFDGMLLAMAHQHEGGVQELVNTFFSFLRRKTDFFIGGEEGMAEKLITQTF-SHHNQ 64
Query: 358 ACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 495
+ R K ++EA++R K + + + ++ + ELTD+
Sbjct: 65 LAQKTRREKIARQEAERREKAERAARLAKEAKSETSGPQIKELTDE 110
>AF241788-1|AAG44476.1| 211|Homo sapiens NPD011 protein.
Length = 211
Score = 89.0 bits (211), Expect = 2e-17
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Frame = +1
Query: 316 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 495
E+++ TF +H + + R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 3 EKLITQTF-SHHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDE 61
Query: 496 XXXXXXXXXXXXXXXXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDL 663
GS DS + EE+D+ K+KGKLKPN GNG DL
Sbjct: 62 EAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADL 120
Query: 664 EHYKWTQTLEEVEIRVP--LRQILRPRDLTVVINKKHLKVGIK 786
+Y+WTQTL E+++ VP + L+ +D+ V I ++HL+VG+K
Sbjct: 121 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 163
>AL356390-6|CAI13560.1| 133|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 133
Score = 69.7 bits (163), Expect = 1e-11
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Frame = +1
Query: 316 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 495
E+++ TF +H + + R K+ ++EA++R K + + + ++ + ELTD+
Sbjct: 3 EKLITQTF-SHHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDE 61
Query: 496 XXXXXXXXXXXXXXXXXXXV----GSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDL 663
GS DS + EE+D+ K+KGKLKPN GNG DL
Sbjct: 62 EAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDE-KDKGKLKPNLGNGADL 120
Query: 664 EHYKWTQTLEEVE 702
+Y+WTQTL E++
Sbjct: 121 PNYRWTQTLSELD 133
>BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing 3
protein.
Length = 361
Score = 54.0 bits (124), Expect = 7e-07
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Frame = +1
Query: 184 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF---------TGGREGEWEQVVKDT 336
E +D LL + Q H G V+D L + FL RKTDF+ G G + +V
Sbjct: 7 ELYDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFYRLLRHPSDRMGFPPGAAQALVLQV 65
Query: 337 FYT--HAKKACDEANR------IKKEKEEADKRLKEIQQRKEQERL-ANDFEPATVTEL- 486
F T H + DE R I++++EE K + KE + + E + TEL
Sbjct: 66 FKTFDHMARQDDEKRRQELEEKIRRKEEEEAKTVSAAAAEKEPVPVPVQEIEIDSTTELD 125
Query: 487 --TDQXXXXXXXXXXXXXXXXXXXVGSGDSSDVTE-PATPEEDDDPKEKGKLKPNAGNGC 657
+ G + E P P +E+ + P++ NG
Sbjct: 126 GHQEVEKVQPPGPVKEMAHGSQEAEAPGAVAGAAEVPREPPILPRIQEQFQKNPDSYNGA 185
Query: 658 DLEHYKWTQTLEEVEIRVPL-RQILRPRDLTVVINKKHLKVGI 783
E+Y W+Q ++E+RVPL + +++ + ++V ++ ++V +
Sbjct: 186 VRENYTWSQDYTDLEVRVPLPKHVVKGKQVSVALSSSSIRVAM 228
>AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein.
Length = 354
Score = 51.6 bits (118), Expect = 4e-06
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Frame = +1
Query: 190 FDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFF---------TGGREGEWEQVVKDTFY 342
+D LL + Q H G V+D L + FL RKTDF+ G G + +V F
Sbjct: 2 YDQALLGILQ-HVGNVQDFLRVLFGFLYRKTDFYRLLRHPSDRMGFPPGAAQALVLQVFK 60
Query: 343 T--HAKKACDEANR------IKKEKEEADKRLKEIQQRKEQERL-ANDFEPATVTEL--- 486
T H + DE R I++++EE K + KE + + E + TEL
Sbjct: 61 TFDHMARQDDEKRRQELEEKIRRKEEEEAKTVSAAAAEKEPVPVPVQEIEIDSTTELDGH 120
Query: 487 TDQXXXXXXXXXXXXXXXXXXXVGSGDSSDVTE-PATPEEDDDPKEKGKLKPNAGNGCDL 663
+ G + E P P +E+ + P++ NG
Sbjct: 121 QEVEKVQPPGPVKEMAHGSQEAEAPGAVAGAAEVPREPPILPRIQEQFQKNPDSYNGAVR 180
Query: 664 EHYKWTQTLEEVEIRVPL-RQILRPRDLTVVINKKHLKVGI 783
E+Y W+Q ++E+RVP+ + +++ + ++V ++ ++V +
Sbjct: 181 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 221
>BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein.
Length = 220
Score = 37.9 bits (84), Expect = 0.051
Identities = 14/57 (24%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 616 KEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPL-RQILRPRDLTVVINKKHLKVGI 783
+E+ + P++ NG E+Y W+Q ++E+RVP+ + +++ + ++V ++ ++V +
Sbjct: 31 QEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 87
>BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing 3
protein.
Length = 220
Score = 37.9 bits (84), Expect = 0.051
Identities = 14/57 (24%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 616 KEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPL-RQILRPRDLTVVINKKHLKVGI 783
+E+ + P++ NG E+Y W+Q ++E+RVP+ + +++ + ++V ++ ++V +
Sbjct: 31 QEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 87
>AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ14164 fis, clone NT2RP1000460, weakly similar to
NUCLEAR MOVEMENT PROTEIN NUDC. ).
Length = 256
Score = 37.9 bits (84), Expect = 0.051
Identities = 14/57 (24%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 616 KEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPL-RQILRPRDLTVVINKKHLKVGI 783
+E+ + P++ NG E+Y W+Q ++E+RVP+ + +++ + ++V ++ ++V +
Sbjct: 31 QEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 87
>AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein.
Length = 220
Score = 37.9 bits (84), Expect = 0.051
Identities = 14/57 (24%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 616 KEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPL-RQILRPRDLTVVINKKHLKVGI 783
+E+ + P++ NG E+Y W+Q ++E+RVP+ + +++ + ++V ++ ++V +
Sbjct: 31 QEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 87
>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
initiation factor 5B protein.
Length = 1220
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 350 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 385
>BC022260-1|AAH22260.1| 400|Homo sapiens Unknown (protein for
IMAGE:4804924) protein.
Length = 400
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 350 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 385
>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
protein.
Length = 1132
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 262 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 297
>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
Length = 1220
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 350 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 385
>AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation
factor IF2 protein.
Length = 1220
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 350 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 385
>AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 350 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 385
>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
Length = 1222
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 355 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLAND 459
K +E R K+E+EE KRL+E++ +RKE+ERL +
Sbjct: 352 KLKEEEERQKREEEERIKRLEELEAKRKEEERLEQE 387
>AL603966-1|CAI12334.1| 95|Homo sapiens family with sequence
similarity 25, member C protein.
Length = 95
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 LSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEA--NRIKKEKEEADKRLKEIQQ 429
L+ +T+ T G E+VVK+ HAK+ ++A IKK +E DK++KEI +
Sbjct: 19 LAHRTEKATEGAIHAVEEVVKEVV-GHAKETGEKAIAEAIKKAQESGDKKMKEITE 73
>AL591684-3|CAH72202.1| 95|Homo sapiens family with sequence
similarity 25, member G protein.
Length = 95
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 LSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEA--NRIKKEKEEADKRLKEIQQ 429
L+ +T+ T G E+VVK+ HAK+ ++A IKK +E DK++KEI +
Sbjct: 19 LAHRTEKATEGAIHAVEEVVKEVV-GHAKETGEKAIAEAIKKAQESGDKKMKEITE 73
>AL391137-3|CAI12205.1| 95|Homo sapiens family with sequence
similarity 25, member B protein.
Length = 95
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 LSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEA--NRIKKEKEEADKRLKEIQQ 429
L+ +T+ T G E+VVK+ HAK+ ++A IKK +E DK++KEI +
Sbjct: 19 LAHRTEKATEGAIHAVEEVVKEVV-GHAKETGEKAIAEAIKKAQESGDKKMKEITE 73
>AL136982-4|CAI17119.1| 95|Homo sapiens family with sequence
similarity 25, member A protein.
Length = 95
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 268 LSRKTDFFTGGREGEWEQVVKDTFYTHAKKACDEA--NRIKKEKEEADKRLKEIQQ 429
L+ +T+ T G E+VVK+ HAK+ ++A IKK +E DK++KEI +
Sbjct: 19 LAHRTEKATEGAIHAVEEVVKEVV-GHAKETGEKAIAEAIKKAQESGDKKMKEITE 73
>U00802-1|AAA16256.1| 649|Homo sapiens drebrin E2 protein.
Length = 649
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 310 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E +++ ++ F+ AKK +E + ++ K+ D+RL+ Q+R EQER
Sbjct: 171 EMKRINREQFWEQAKKE-EELRKEEERKKALDERLRFEQERMEQER 215
>D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein.
Length = 482
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ +E Q+RK +E+
Sbjct: 79 EQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQ 110
>D17530-1|BAA04480.1| 649|Homo sapiens drebrin E protein.
Length = 649
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 310 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E +++ ++ F+ AKK +E + ++ K+ D+RL+ Q+R EQER
Sbjct: 171 EMKRINREQFWEQAKKE-EELRKEEERKKALDERLRFEQERMEQER 215
>BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ +E Q+RK +E+
Sbjct: 79 EQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQ 110
>BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ +E Q+RK +E+
Sbjct: 79 EQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQ 110
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ +E Q+RK +E+
Sbjct: 79 EQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQ 110
>BC007567-1|AAH07567.1| 649|Homo sapiens drebrin 1 protein.
Length = 649
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 310 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E +++ ++ F+ AKK +E + ++ K+ D+RL+ Q+R EQER
Sbjct: 171 EMKRINREQFWEQAKKE-EELRKEEERKKALDERLRFEQERMEQER 215
>BC007281-1|AAH07281.1| 649|Homo sapiens drebrin 1 protein.
Length = 649
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 310 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E +++ ++ F+ AKK +E + ++ K+ D+RL+ Q+R EQER
Sbjct: 171 EMKRINREQFWEQAKKE-EELRKEEERKKALDERLRFEQERMEQER 215
>BC000283-1|AAH00283.1| 649|Homo sapiens drebrin 1 protein.
Length = 649
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 310 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E +++ ++ F+ AKK +E + ++ K+ D+RL+ Q+R EQER
Sbjct: 171 EMKRINREQFWEQAKKE-EELRKEEERKKALDERLRFEQERMEQER 215
>AL110225-1|CAB53683.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 310 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E +++ ++ F+ AKK +E + ++ K+ D+RL+ Q+R EQER
Sbjct: 173 EMKRINREQFWEQAKKE-EELRKEEERKKALDERLRFEQERMEQER 217
>M83216-2|AAA58420.1| 538|Homo sapiens caldesmon protein.
Length = 538
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 287 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 334
>M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein.
Length = 793
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 542 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 589
>M64110-1|AAA35636.1| 538|Homo sapiens caldesmon protein.
Length = 538
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 287 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 334
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 325 VKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLAND 459
+ ++ Y H +E + KKE+ E++K +KE+Q + E ERL +
Sbjct: 678 IAESNYKHLGGITEEDLKQKKEQLESEKTIKELQGQLEYERLRRE 722
>D90453-1|BAA14419.1| 532|Homo sapiens l-caldesmon II protein.
Length = 532
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 281 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 328
>D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein.
Length = 558
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 307 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 354
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 325 VKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLAND 459
+ ++ Y H +E + KKE+ E++K +KE+Q + E ERL +
Sbjct: 505 IAESNYKHLGGITEEDLKQKKEQLESEKTIKELQGQLEYERLRRE 549
>BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein.
Length = 258
Score = 32.3 bits (70), Expect = 2.5
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 325 VKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLAND 459
+ ++ Y H +E + KKE+ E++K +KE+Q + E ERL +
Sbjct: 154 IAESNYKHLGGITEEDLKQKKEQLESEKTIKELQGQLEYERLRRE 198
>BC040354-1|AAH40354.1| 538|Homo sapiens caldesmon 1 protein.
Length = 538
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 287 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 334
>AF247820-1|AAF69498.3| 481|Homo sapiens NAG22 protein protein.
Length = 481
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 301 REGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
R GE E + ++A E +KK++EE K L+E +QR++QE
Sbjct: 287 RRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQE 334
>U51224-1|AAA98669.1| 479|Homo sapiens U2AFBPL protein.
Length = 479
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ E Q+RK +E+
Sbjct: 84 EQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQ 115
>D49676-1|BAA08532.1| 479|Homo sapiens U2AF1-RS1 protein.
Length = 479
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ E Q+RK +E+
Sbjct: 84 EQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQ 115
>BC113599-1|AAI13600.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ E Q+RK +E+
Sbjct: 84 EQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQ 115
>BC104811-1|AAI04812.1| 479|Homo sapiens ZRSR1 protein protein.
Length = 479
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
++ E RIKKEKEEA K+ E Q+RK +E+
Sbjct: 84 EQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQ 115
>AL645617-2|CAI16756.1| 579|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 579
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 453
KD AKK +A K+KEE +K+ + ++RK+QE A
Sbjct: 38 KDDIKLTAKKEVSKAPEESKKKEEEEKKKHQEEERKKQEEQA 79
>AL138898-5|CAH73459.1| 579|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 579
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 453
KD AKK +A K+KEE +K+ + ++RK+QE A
Sbjct: 38 KDDIKLTAKKEVSKAPEESKKKEEEEKKKHQEEERKKQEEQA 79
>AK096191-1|BAC04721.1| 579|Homo sapiens protein ( Homo sapiens
cDNA FLJ38872 fis, clone MESAN2013674, highly similar to
Homo sapiens regulator of nonsense transcripts 2 (RENT2)
mRNA. ).
Length = 579
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 453
KD AKK +A K+KEE +K+ + ++RK+QE A
Sbjct: 38 KDDIKLTAKKEVSKAPEESKKKEEEEKKKHQEEERKKQEEQA 79
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>BC090919-1|AAH90919.1| 109|Homo sapiens UPF2 protein protein.
Length = 109
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>AF301222-1|AAG39935.1| 138|Homo sapiens unknown protein.
Length = 138
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKE 438
KK +E R KKEKE+ ++ EIQ++KE
Sbjct: 7 KKNAEECERKKKEKEKEKQQQAEIQEKKE 35
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 38 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 76
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 328 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 444
KD AKK +A KK++ E DKR KE ++RK+++
Sbjct: 64 KDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKD 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,511,522
Number of Sequences: 237096
Number of extensions: 1728084
Number of successful extensions: 6875
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 5982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6829
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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