Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J12
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 132 4e-31
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 132 4e-31
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z82086-8|CAN99701.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z82086-7|CAB04996.1| 294|Caenorhabditis elegans Hypothetical pr... 33 0.37
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 31 0.86
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 31 1.5
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 1.5
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 1.5
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 30 2.0
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 30 2.0
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 30 2.0
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 30 2.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 2.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 2.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 2.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.5
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 29 3.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.5
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 29 4.6
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 4.6
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 29 4.6
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 6.1
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 29 6.1
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 28 8.1
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 28 8.1
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 132 bits (318), Expect = 4e-31
Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 2/203 (0%)
Frame = +1
Query: 184 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKAC 363
ERFDS+LL+MAQQ GGV ++L+ + FLSRKTDF++G + ++ + F H KA
Sbjct: 5 ERFDSVLLSMAQQLSGGVPEMLDVLFEFLSRKTDFYSGAGVDQARTLLLEKFDKHGGKAM 64
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXX 543
EA KK KEE +++L E ++ ++ + +F A V E+TD+
Sbjct: 65 KEAEEAKKRKEEQERKLAE-RRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKEQAKNSVEN 123
Query: 544 XXXVGSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPLRQ 723
D+ T ED+D K +KPN+GNG DL Y+WTQTL+E+E+++P+
Sbjct: 124 LEKF--VDNEGETSKDAEVEDEDSK---LMKPNSGNGADLAKYQWTQTLQELEVKIPIAA 178
Query: 724 --ILRPRDLTVVINKKHLKVGIK 786
++ RD+ V I K + VG+K
Sbjct: 179 GFAIKSRDVVVKIEKTSVSVGLK 201
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 132 bits (318), Expect = 4e-31
Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 2/203 (0%)
Frame = +1
Query: 184 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKAC 363
ERFDS+LL+MAQQ GGV ++L+ + FLSRKTDF++G + ++ + F H KA
Sbjct: 5 ERFDSVLLSMAQQLSGGVPEMLDVLFEFLSRKTDFYSGAGVDQARTLLLEKFDKHGGKAM 64
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXX 543
EA KK KEE +++L E ++ ++ + +F A V E+TD+
Sbjct: 65 KEAEEAKKRKEEQERKLAE-RRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKEQAKNSVEN 123
Query: 544 XXXVGSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPLRQ 723
D+ T ED+D K +KPN+GNG DL Y+WTQTL+E+E+++P+
Sbjct: 124 LEKF--VDNEGETSKDAEVEDEDSK---LMKPNSGNGADLAKYQWTQTLQELEVKIPIAA 178
Query: 724 --ILRPRDLTVVINKKHLKVGIK 786
++ RD+ V I K + VG+K
Sbjct: 179 GFAIKSRDVVVKIEKTSVSVGLK 201
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATV 477
K+ D+ +IKKE EEA+K+ KE ++++ +E N E ++
Sbjct: 266 KERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSI 307
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLAN 456
KK +EA KK+KEE +KR KE+++ +E++ N
Sbjct: 276 KKEVEEAE--KKKKEEKEKRRKEVKKNREEQLSIN 308
>Z82086-8|CAN99701.1| 309|Caenorhabditis elegans Hypothetical
protein ZK228.4b protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = -3
Query: 786 FDANLEVFLIDDHCQIAWPQNLSQRHSNLYFFQRLCPFVVLQITSISSIRFQLP 625
FDA +++ + DD C + N+S+++S ++ F L P+ +++ I +F++P
Sbjct: 97 FDAIMDI-VGDDTCALFSAVNMSKKYSEVFGFDNLSPYWIME-AKIDPSKFKIP 148
>Z82086-7|CAB04996.1| 294|Caenorhabditis elegans Hypothetical
protein ZK228.4a protein.
Length = 294
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = -3
Query: 786 FDANLEVFLIDDHCQIAWPQNLSQRHSNLYFFQRLCPFVVLQITSISSIRFQLP 625
FDA +++ + DD C + N+S+++S ++ F L P+ +++ I +F++P
Sbjct: 82 FDAIMDI-VGDDTCALFSAVNMSKKYSEVFGFDNLSPYWIME-AKIDPSKFKIP 133
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +1
Query: 148 RLNTKVNMANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVV 327
+LN K+N+ P ++ + H G + L N+ + S + F EG W +
Sbjct: 371 KLNPKLNLLICPNIIQKLITGSLEAHTNGFRFLFNSFSRYTSLRAFF----EEGGWSFLN 426
Query: 328 KDTFYTHAKKACDEANRIKKEKEEA 402
++ A D+++ E+E+A
Sbjct: 427 AESDNEEAMDDSDDSDAYDPEEEDA 451
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1721 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1780
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 1781 RREKQRKEEER 1791
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2012 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2071
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 2072 RREKQRKEEER 2082
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2027 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2086
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 2087 RREKQRKEEER 2097
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1831 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1890
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 1891 RREKQRKEEER 1901
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1721 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1780
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 1781 RREKQRKEEER 1791
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2012 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2071
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 2072 RREKQRKEEER 2082
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2027 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2086
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 2087 RREKQRKEEER 2097
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 250 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 423
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1831 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1890
Query: 424 Q---QRKEQER 447
+ QRKE+ER
Sbjct: 1891 RREKQRKEEER 1901
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLAND 459
DE + +KEKE K +E ++RKE++RL +
Sbjct: 151 DEEEQKRKEKERRKKEKREKKERKEKKRLEKE 182
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 465
D A R K+E+EE +K+ EIQ +E+E+ ++E
Sbjct: 760 DPATR-KREREEREKKEAEIQAAEEEEKQRKEYE 792
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 465
D A R K+E+EE +K+ EIQ +E+E+ ++E
Sbjct: 760 DPATR-KREREEREKKEAEIQAAEEEEKQRKEYE 792
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 465
D A R K+E+EE +K+ EIQ +E+E+ ++E
Sbjct: 760 DPATR-KREREEREKKEAEIQAAEEEEKQRKEYE 792
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLAND 459
DE + +KEKE K +E ++RKE++RL +
Sbjct: 151 DEEEQKRKEKERRKKEKREKKKRKEKKRLEKE 182
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 367 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 486
E R++ EK++ ++R++E++ Q ND +TEL
Sbjct: 1089 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITEL 1128
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 367 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 486
E R++ EK++ ++R++E++ Q ND +TEL
Sbjct: 1162 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITEL 1201
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 367 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 486
E R++ EK++ ++R++E++ Q ND +TEL
Sbjct: 1162 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITEL 1201
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTD 492
+E R K+E+EEA+K+ K ++ +E ND P T + + D
Sbjct: 481 EEEERRKREEEEAEKQRK--REEREVRFSKNDISPTTSSGVAD 521
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +1
Query: 385 KEKEEADKRLKEIQQRKEQER 447
K+KEEAD++ KE ++R+++ER
Sbjct: 332 KQKEEADRKAKEEREREKKER 352
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTD 492
+E R K+E+EEA+K+ K ++ +E ND P T + + D
Sbjct: 481 EEEERRKREEEEAEKQRK--REEREVRFSKNDISPTTSSGVAD 521
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 340 YTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 495
Y +AKKA + +KEK+E D++ + +Q E E AN + T +L DQ
Sbjct: 78 YENAKKASELERLREKEKKEWDEKERRMQMEAENE--ANQHKTQT-EKLKDQ 126
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 340 YTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 495
Y +AKKA + +KEK+E D++ + +Q E E AN + T +L DQ
Sbjct: 923 YENAKKASELERLREKEKKEWDEKERRMQMEAENE--ANQHKTQT-EKLKDQ 971
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 316 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
E+VVK +K D+ +K+KE+ ++ KE ++ KE+ER
Sbjct: 356 EKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKER 399
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 601 EDDDPKEKGKLKPNAGNGCDLEHYKWTQTLEEVEIRVPLRQILRPRDLT 747
+DDD + G LK GNG + W+++ R P R+ R R T
Sbjct: 376 KDDDAVDWGNLKVGGGNG-GMNRRSWSRSRSRSRSRSPPRRRSRSRSRT 423
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 352 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 453
K D R+K+EK+ +R KE ++RK +E+ A
Sbjct: 409 KAVADFKQRVKEEKDAEKERAKEEKKRKMREKTA 442
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +1
Query: 316 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER-----LANDFEPATVT 480
+Q++ ++ + K+ + A +KK+ EEA ++ +++ E ER L +D E + ++
Sbjct: 234 KQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESD-ESSAIS 292
Query: 481 ELTDQ 495
E+T Q
Sbjct: 293 EITKQ 297
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +1
Query: 316 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER-----LANDFEPATVT 480
+Q++ ++ + K+ + A +KK+ EEA ++ +++ E ER L +D E + ++
Sbjct: 234 KQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESD-ESSAIS 292
Query: 481 ELTDQ 495
E+T Q
Sbjct: 293 EITKQ 297
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +1
Query: 571 SDVTEPATPEEDDDPKEKGKLKPNAGNG 654
SDV E ATP EDD EK K K NG
Sbjct: 135 SDVKESATPGEDD---EKEKTKTEGANG 159
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +1
Query: 382 KKEKEEADKRLKEIQQRKEQERLANDF 462
K EKEEADK +KEIQ KEQ F
Sbjct: 230 KCEKEEADKHVKEIQ--KEQMNSTKKF 254
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 346 HAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 447
H K D +R ++++ E D+R + +Q+KE+ER
Sbjct: 130 HKKHKKDREHRDREKERERDERKERERQQKEKER 163
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +1
Query: 364 DEANRIKKEKEEADKRLKEIQQRKEQER 447
DE +R ++K+E ++LKE+++R+E+ R
Sbjct: 206 DEKHRKDRKKKEKKQKLKEMEKRREKLR 233
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 382 KKEKEEADKRLKEIQQRKEQERLAND 459
KKEKE DK+L+E ++++E+ + A +
Sbjct: 134 KKEKERLDKKLEEDKKKEEKRKEAEE 159
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 274 RKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 453
RKT F ++ + E+ D +K E + +E+ + DKR E +++K++ER
Sbjct: 1024 RKTQDFQDQQDADIERAEADE---QRRKMNVERAKKDEERAKKDKRDAEERRKKDEERAK 1080
Query: 454 NDFEPA 471
D E A
Sbjct: 1081 KDKEDA 1086
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,733,194
Number of Sequences: 27780
Number of extensions: 287620
Number of successful extensions: 1547
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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