Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J11
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 223 1e-58
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 223 2e-58
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 223 2e-58
04_01_0042 + 473912-474058,474208-474349,474442-476264 219 2e-57
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 169 2e-42
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 134 7e-32
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 128 6e-30
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 121 7e-28
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 29 3.7
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.7
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 223 bits (545), Expect = 1e-58
Identities = 107/144 (74%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK
Sbjct: 46 KIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKE 105
Query: 500 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDS 676
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R S
Sbjct: 106 FMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTS 165
Query: 677 GEPLGRGTKIVLHVKEDLAEFMEE 748
GE LGRGTKI L++K+D E++EE
Sbjct: 166 GEQLGRGTKITLYLKDDQLEYLEE 189
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IINTFYSNKEIFLRELISNSSDAL
Sbjct: 21 IINTFYSNKEIFLRELISNSSDAL 44
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 189 AEVETFAFQAEIAQLMS 239
+E ETFAFQAEI QL+S
Sbjct: 3 SETETFAFQAEINQLLS 19
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 223 bits (544), Expect = 2e-58
Identities = 106/144 (73%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 46 KIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKE 105
Query: 500 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDS 676
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R S
Sbjct: 106 FMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTS 165
Query: 677 GEPLGRGTKIVLHVKEDLAEFMEE 748
GE LGRGTKI L++K+D E++EE
Sbjct: 166 GEQLGRGTKITLYLKDDQLEYLEE 189
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IINTFYSNKEIFLRELISNSSDAL
Sbjct: 21 IINTFYSNKEIFLRELISNSSDAL 44
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 189 AEVETFAFQAEIAQLMS 239
+E ETFAFQAEI QL+S
Sbjct: 3 SETETFAFQAEINQLLS 19
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 223 bits (544), Expect = 2e-58
Identities = 106/144 (73%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
KIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 46 KIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKE 105
Query: 500 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDS 676
FMEAL AGAD+SMIGQFGVGFYS+YLVA+RV V +KHNDDEQYVWES AGGSFTV R S
Sbjct: 106 FMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTS 165
Query: 677 GEPLGRGTKIVLHVKEDLAEFMEE 748
GE LGRGTKI L++K+D E++EE
Sbjct: 166 GEQLGRGTKITLYLKDDQLEYLEE 189
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IINTFYSNKEIFLRELISNSSDAL
Sbjct: 21 IINTFYSNKEIFLRELISNSSDAL 44
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 189 AEVETFAFQAEIAQLMS 239
+E ETFAFQAEI QL+S
Sbjct: 3 SETETFAFQAEINQLLS 19
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 219 bits (535), Expect = 2e-57
Identities = 104/144 (72%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
KIR+ESLTD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK
Sbjct: 53 KIRFESLTDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKE 112
Query: 500 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-S 676
FMEALQAGAD+SMIGQFGVGFYS+YLVA++V V +KHNDDEQYVWES AGGSFTV D +
Sbjct: 113 FMEALQAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTA 172
Query: 677 GEPLGRGTKIVLHVKEDLAEFMEE 748
GE LGRGTKI L +K+D E++EE
Sbjct: 173 GERLGRGTKITLFLKDDQLEYLEE 196
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IINTFYSNKEIFLRELISNSSDAL
Sbjct: 28 IINTFYSNKEIFLRELISNSSDAL 51
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 177 ETQPAEVETFAFQAEIAQLMS 239
+ Q AE ETFAFQAEI QL+S
Sbjct: 6 DVQMAEKETFAFQAEINQLLS 26
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 169 bits (412), Expect = 2e-42
Identities = 85/146 (58%), Positives = 109/146 (74%), Gaps = 3/146 (2%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 493
KIR+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT
Sbjct: 145 KIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGT 204
Query: 494 KAFMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD 673
AF+E +Q G D+++IGQFGVGFYS YLVAD V V SKHNDD+Q+VWES A GSF + D
Sbjct: 205 SAFVEKMQTGGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGSFAISED 264
Query: 674 S-GEPLGRGTKIVLHVKEDLAEFMEE 748
+ EPLGRGT+I LH++++ E++EE
Sbjct: 265 TWNEPLGRGTEIRLHLRDEAKEYVEE 290
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IIN+ YSNK+IFLRELISN+SDAL
Sbjct: 120 IINSLYSNKDIFLRELISNASDAL 143
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 134 bits (325), Expect = 7e-32
Identities = 71/144 (49%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
K+RY S+TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT
Sbjct: 393 KLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAK 452
Query: 500 FMEAL----QAGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSA-GGSFT 661
F++AL +AG D ++IGQFGVGFYS++LV+D+V V +K D+QYVWE A S+T
Sbjct: 453 FLKALKESQEAGVDSNLIGQFGVGFYSAFLVSDKVAVSTKSPKSDKQYVWEGEAESSSYT 512
Query: 662 VR--PDSGEPLGRGTKIVLHVKED 727
+R D + L RGT++ L++K +
Sbjct: 513 IREETDPEKLLPRGTRLTLYLKRE 536
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
I+++ YSNKE+FLREL+SN+SDAL
Sbjct: 368 IVHSLYSNKEVFLRELVSNASDAL 391
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 128 bits (309), Expect = 6e-30
Identities = 72/144 (50%), Positives = 97/144 (67%), Gaps = 8/144 (5%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
K+R+ +TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT
Sbjct: 382 KLRFLGVTDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSK 441
Query: 500 FMEALQ----AGADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWESSAGGSFTV 664
F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVWE A S V
Sbjct: 442 FLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWEGVADSSSYV 501
Query: 665 RPDSGEP---LGRGTKIVLHVKED 727
+ +P L RGT+I L ++ D
Sbjct: 502 IKEETDPEKMLTRGTQITLVLRPD 525
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
I+++ YS+KE+FLREL+SN+SDAL
Sbjct: 357 IVHSLYSHKEVFLRELVSNASDAL 380
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 121 bits (292), Expect = 7e-28
Identities = 73/153 (47%), Positives = 99/153 (64%), Gaps = 17/153 (11%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNLG 472
K+R+ S+TD S L G EL I+I P+ GT+TI DTGIGMTK +L + LG
Sbjct: 123 KLRFLSVTDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLG 182
Query: 473 TIAKSGTKAFMEALQA----GADISMIGQFGVGFYSSYLVADRVTVHSKH-NDDEQYVWE 637
TIA+SGT F++AL+ GAD +IGQFGVGFYS++LVA++V V +K D+QYVWE
Sbjct: 183 TIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKADKQYVWE 242
Query: 638 SSAGGSFTVRPDSGEP---LGRGTKIVLHVKED 727
+ A S V + +P L RGT+I L +++D
Sbjct: 243 AMADSSSYVIKEETDPEKMLTRGTQITLFLRDD 275
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
I+++ YS+KE+FLREL+SN+SDAL
Sbjct: 98 IVHSLYSHKEVFLRELVSNASDAL 121
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +2
Query: 422 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVG 559
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVG 150
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 370 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 537
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,875,000
Number of Sequences: 37544
Number of extensions: 477544
Number of successful extensions: 1135
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -