Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J11
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 234 5e-62
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 150 2e-36
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 96 3e-20
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 96 3e-20
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 94 1e-19
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.5
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.5
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.8
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.5
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 234 bits (573), Expect = 5e-62
Identities = 110/143 (76%), Positives = 128/143 (89%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
KIRY++LT+PS+LD+GKEL+IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKA
Sbjct: 46 KIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKA 105
Query: 500 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSG 679
FMEALQAGADISMIGQFGVGFYS++LVAD+V V SK+NDD+ Y WESSAGGSF VRP +
Sbjct: 106 FMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPFND 165
Query: 680 EPLGRGTKIVLHVKEDLAEFMEE 748
+ RGTKIV+H+KED +F+EE
Sbjct: 166 PEVTRGTKIVMHIKEDQIDFLEE 188
Score = 48.4 bits (110), Expect = 7e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IINTFYSNKEI+LRELISN+SDAL
Sbjct: 21 IINTFYSNKEIYLRELISNASDAL 44
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 751 QIKEIVKETXQFIGYXSS*WLKKTRKKLSDDE 846
+IKEIVK+ QFIGY ++K R+K +DE
Sbjct: 190 KIKEIVKKHSQFIGYPIKLVVEKEREKEVEDE 221
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 198 ETFAFQAEIAQLMS 239
ETFAFQAEIAQLMS
Sbjct: 6 ETFAFQAEIAQLMS 19
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 150 bits (363), Expect = 2e-36
Identities = 77/148 (52%), Positives = 104/148 (70%), Gaps = 6/148 (4%)
Frame = +2
Query: 320 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 499
KIR SLTDP +L +E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT
Sbjct: 102 KIRLLSLTDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSE 161
Query: 500 FMEALQAGADIS-----MIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTV 664
F+ L A S +IGQFGVGFY+++LVADRV V +K+NDD+QY+WES + SFT+
Sbjct: 162 FLSKLMDTATSSDQQQDLIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDS-ASFTI 220
Query: 665 RPD-SGEPLGRGTKIVLHVKEDLAEFME 745
D G L RGT+I L++KE+ A+F+E
Sbjct: 221 SKDPRGNTLKRGTQITLYLKEEAADFLE 248
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDAL 315
IIN+ Y NKEIFLRELISN+SDAL
Sbjct: 77 IINSLYRNKEIFLRELISNASDAL 100
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 96.3 bits (229), Expect = 3e-20
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 4/127 (3%)
Frame = +2
Query: 380 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 559
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 560 FYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVK-ED 727
FYS+++VAD V V ++ +D + W + S+ + SG L GTKI + +K D
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG--LQTGTKIEIRLKVGD 216
Query: 728 LAEFMEE 748
A + EE
Sbjct: 217 SATYAEE 223
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDALXQNQ 327
+ + YS+ E+F+RELISN+SDAL + +
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRR 85
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 96.3 bits (229), Expect = 3e-20
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 4/127 (3%)
Frame = +2
Query: 380 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 559
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 560 FYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVK-ED 727
FYS+++VAD V V ++ +D + W + S+ + SG L GTKI + +K D
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG--LQTGTKIEIRLKVGD 216
Query: 728 LAEFMEE 748
A + EE
Sbjct: 217 SATYAEE 223
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDALXQNQ 327
+ + YS+ E+F+RELISN+SDAL + +
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRR 85
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 94.3 bits (224), Expect = 1e-19
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = +2
Query: 380 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 559
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 560 FYSSYLVADRVTVHSK---HNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVK-ED 727
FYS+++VAD V V ++ +D + W + S+ + SG L GTKI + +K D
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADGLQWTWNGDNSYEIAETSG--LQTGTKIEIRLKVGD 216
Query: 728 LAEFME 745
A + E
Sbjct: 217 SATYAE 222
Score = 35.5 bits (78), Expect = 0.051
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +1
Query: 244 IINTFYSNKEIFLRELISNSSDALXQNQ 327
+ + YS+ E+F+RELISN+SDAL + +
Sbjct: 58 VAKSLYSHSEVFVRELISNASDALEKRR 85
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 379 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 540
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 379 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 540
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.8
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 400 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 540
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.8
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 367 QRAVHQDHSQQERGHSYDH 423
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 394 QQERGHSYDHRYRYWYDQGRFGEQFGN 474
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 28.3 bits (60), Expect = 7.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 322 FVLKRPMNWKSAHEGKFLCWS 260
F+ + +W+ AHEG+ + WS
Sbjct: 85 FITLKENDWRDAHEGRMIIWS 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,561,901
Number of Sequences: 27780
Number of extensions: 397074
Number of successful extensions: 1067
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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