Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_J01
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 79 3e-15
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 36 0.049
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 32 0.60
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 3.2
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 29 4.3
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 29 5.6
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 7.4
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.4
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 28 7.4
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 28 7.4
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 79.4 bits (187), Expect = 3e-15
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +3
Query: 150 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 326
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 327 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 506
++L T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPT 115
Query: 507 XXXXNKFLNGIENFDPTKLKHTET 578
K L +FD + L H ET
Sbjct: 116 DVAREKTLQMAASFDKSALHHVET 139
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/102 (37%), Positives = 51/102 (50%)
Frame = +3
Query: 330 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 509
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK L
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 510 XXXNKFLNGIENFDPTKLKHTETCEKNRSPQRTSLSKRNQLE 635
+ + I NF LK TET EKN P T +++ L+
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQ 124
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 35.5 bits (78), Expect = 0.049
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +2
Query: 344 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDS--DEAHDDGRKESTAPDRSYRSGEGK 517
+D + +R+ + S + GR RT ++ + D R +P+RS RS E +
Sbjct: 233 KDKNRKKEKTERKRKRSHSSSDRRGR-RTSKESRRRSRSRDTHRTRRRSPERSRRSTETR 291
Query: 518 EQIPERHRELRSH*AE--AHGDVRKEPLPTKDVIEQEK 625
+ PER RS E + R+ +++VI++EK
Sbjct: 292 NERPERPSRWRSRSRERKEYDSYRRRRSRSREVIDKEK 329
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.60
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Frame = +2
Query: 332 AEAHRDSGEEPASGQRRCRSGESPPEPLGRSRT----LRQDSD--EAHDDGRKESTAPDR 493
A + S PA G + P R R +R DSD E H K+S A D
Sbjct: 85 ASVSKASASTPARGAKAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE 144
Query: 494 SYRSGEGKEQIPERHRELRSH*AE---AHGDVRKEPLPTKDVIEQEK 625
+ +E +P++ +E++ E G+ +E +D+ E EK
Sbjct: 145 E-EVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEK 190
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +2
Query: 329 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPD--RSYR 502
P + E PA RR R S + + T DS + DD S++ D S
Sbjct: 58 PRSSELPISESPAPRARRARKQRSKRKSVKPPNTSSDDSSDDSDDSSSSSSSDDSVSSKS 117
Query: 503 SGEGKEQIPERHRELRSH*AEAHG 574
S + P R R+ + + HG
Sbjct: 118 STNSSDSSPCRCRDGLAEWEQRHG 141
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 335 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKE 475
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 390 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 265
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 390 LRQRLCPEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRL 265
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 356 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 535
+ P +RR + E + RSR R+ HD RK + + RS RS K ++
Sbjct: 7 KSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRS-RSRSPKRSRRDK 65
Query: 536 HRELRSH*AEAHGDVR--KEPLPTK 604
E + E G++R P P K
Sbjct: 66 KEEKQEQ-EEEDGEIRDTTPPAPEK 89
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = +2
Query: 323 FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 502
+ P+ RDS + G RR RS + RSR +D D + D E +A R
Sbjct: 329 YVPSRKSRDSRDAGRRGSRRDRSRD-------RSRDRDRDRDRDNRDRYFEKSANSRREE 381
Query: 503 SGEGKEQIPERHR 541
+EQ ER R
Sbjct: 382 EQNRREQQRERER 394
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 381 VVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTK 560
V+ E+ Q +E+F KT+ + + EEK + F + E + +
Sbjct: 297 VIMLEEFKQVFNQYLENFKKTENRPHSHEEKGMMQIEKSNYKDIIIKLFESRTERWMKNR 356
Query: 561 LKHTETCEKNRSPQRTSLSKRNQL 632
+ E C+K S R ++K+N+L
Sbjct: 357 IN--ELCDKKISINRELINKKNEL 378
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 369 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 217
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 369 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 217
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 28.3 bits (60), Expect = 7.4
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = +2
Query: 344 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 523
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 524 IPERHRELRSH*AEAHGDVRKEPLPTK 604
P R RE RS +E PLP K
Sbjct: 124 SPRRRRE-RS--SERKQSEEPAPLPEK 147
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 369 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 217
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -3
Query: 369 EAGSSPESRCASAGSNQTSRYRRIKTSGSSQWQRLQQTEAQSFHWCRRHGD 217
EA S +S + AG Y K S W+ ++ ++++ +H D
Sbjct: 51 EASDSTKSLTSDAGDAILGAYDAAKEKASDAWESTKEMVSEAYEQAEKHAD 101
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +3
Query: 258 SAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFD 437
S K + L +E S H + ++KN D ++ E Q L+G F+
Sbjct: 367 SCNSTIEHKEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFN 426
Query: 438 KTQMKH 455
+MK+
Sbjct: 427 SPEMKN 432
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 284 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 192
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 28.3 bits (60), Expect = 7.4
Identities = 27/87 (31%), Positives = 38/87 (43%)
Frame = +2
Query: 344 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 523
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 524 IPERHRELRSH*AEAHGDVRKEPLPTK 604
P R RE RS +E PLP K
Sbjct: 124 SPRRRRE-RS--SERKQSEEPAPLPEK 147
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/80 (30%), Positives = 32/80 (40%)
Frame = +2
Query: 326 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 505
EP S EP G R CR + R R R+ S+E H + + A D Y+
Sbjct: 50 EPHITDIPSSSEPQEGSRECRLSKEAHRK--RLRRARETSEETH---TRLAKAAD--YKR 102
Query: 506 GEGKEQIPERHRELRSH*AE 565
E+ E +RE AE
Sbjct: 103 KRCSEETEEEYRERLKRQAE 122
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +2
Query: 326 EPAEAH-RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSY- 499
+P E R E Q+R GE P + R + D+ D+ +E P R +
Sbjct: 141 DPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDE--EEEERPRRPHQ 198
Query: 500 RSGEGKEQIPERHRELRSH*AEAHGDVRKEP 592
R G+ E E ++ R HG+ +EP
Sbjct: 199 RRGDSYEDEEEDRKKYRPR----HGEEEEEP 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,803,744
Number of Sequences: 27780
Number of extensions: 366348
Number of successful extensions: 1422
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -