Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I22
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.28
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 30 0.37
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 30 0.37
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.65
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 28 2.0
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 28 2.0
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 27 2.6
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 27 3.5
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 27 3.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.5
SPCC1259.01c |rps1802|rps18-2, SPCC825.06c|40S ribosomal protein... 27 4.6
SPBC16D10.11c |rps1801|rps18-1|40S ribosomal protein S18|Schizos... 27 4.6
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 27 4.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 6.1
SPBC776.07 |||mitochondrial Mam33 family protein|Schizosaccharom... 26 6.1
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 26 6.1
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 6.1
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 26 8.1
SPAC186.05c |||human TMEM165 homolog|Schizosaccharomyces pombe|c... 26 8.1
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 8.1
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 26 8.1
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 30.7 bits (66), Expect = 0.28
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 392 DKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEH-KLIIQERALR 568
++ + Q + D+ +L +S K++ EMQ +G E ++ EEH KL Q ++
Sbjct: 659 EELLDNQQKLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIK 718
Query: 569 TLFADAEKEERELFATMSAAVKLGHXRERAHAERNK 676
F + R+L + + + L + ++ K
Sbjct: 719 NQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKK 754
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = +2
Query: 350 EEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCT 529
EEI ++ +I Q+ + Q + R ++++ES+ KEL +++ + DE +L +
Sbjct: 954 EEIERLKVDIIGLQNASLNMQSLKDSDNRTISDLESKNKELEKKLK---EADEYWLLIVE 1010
Query: 530 EEHKLIIQERALRTLFADAEKEERE 604
E +++ L A E+ +
Sbjct: 1011 ELESKRTKDKELLRQCGQAVSEDEQ 1035
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 30.3 bits (65), Expect = 0.37
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 290 DNLTKKVQDLVTKYEKFTGVEEIMAI-QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLK 466
++LTK++++ K +K +EEI A N++ D Q K + +D + + LK
Sbjct: 28 EHLTKRIRNFTKKKQKILKLEEIAASDSNSLNDDQRKALQGKD-------AVLTTLNELK 80
Query: 467 ELHAEMQNTMKGDEKY 514
EL +++ T DEK+
Sbjct: 81 ELLSQIDATRIRDEKH 96
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 30.3 bits (65), Expect = 0.37
Identities = 21/81 (25%), Positives = 44/81 (54%)
Frame = -2
Query: 411 WAAMNLSCASITVFCIAIISSTPVNFSYLVTKSCTFLVKLSYLNLSATSETFVAGTYLVI 232
+ A++ +C+++ V ++ +F+ +V + CT L+ + L S+TSET G+Y+
Sbjct: 177 YVALSFACSALIVLPTKFLARFS-SFN-VVFQICTILIFIISLAASSTSETRNTGSYIFG 234
Query: 231 S*STFSRFVTFNCAKFILSFS 169
+ +S + + FIL F+
Sbjct: 235 NFENYSGWTNMGWS-FILCFT 254
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.5 bits (63), Expect = 0.65
Identities = 35/167 (20%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Frame = +2
Query: 167 RLKDKIN-LAQLNVTNREKVDQLITKYVPATKVS-EVAERFKYDNLTKKVQDLVTKYEKF 340
+L++K++ L+++N + + ++ T+ + + + E +R K D+L+ ++++ K K
Sbjct: 224 KLEEKVDYLSKVNDVEQSQNVKVFTERIRFLENALEKVQREK-DSLSTEMEE--DKSNKE 280
Query: 341 TGVE-EIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYL 517
E EI +QN + + ++ AQD + ++A ++ +++E + + +E
Sbjct: 281 VDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEE-KENSSSAFENEENSS 339
Query: 518 QLCTEEHKLIIQERA------LRTLFADAEKE-ERELFATMSAAVKL 637
+ +E I+Q + ++ L AD EKE E ++ A++ L
Sbjct: 340 YVHLQEDYAILQAKCDEFADRIQVLTADLEKEKENQIMHESEASIGL 386
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 119 KNNMRKWQTASXIIAQRLKDKINLAQLNVTNREKVDQLITKYVPATKVSEVAERFK--YD 292
K+ ++K++ S + A + + A+ + K D ++ KY P+ + V+E+F+ D
Sbjct: 1087 KSLIQKYKVKSVLSAVDSETASSYAKKALKKPYKYDPVLDKYPPSRYLGSVSEKFQRAVD 1146
Query: 293 NLTKKVQDLVTKYEKFTGVEE 355
T+K D + +K + +++
Sbjct: 1147 EYTQKNPDKLIASKKESKLDD 1167
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 378 TVFCIAIISSTPVNFSYLVTK-SCTFLVKLSYLNLSATSETFVAGTYLVIS*STFSRFVT 202
T+FC + TP +YL+TK CT+ + Y L T + +S F + T
Sbjct: 335 TIFCDEEVLKTPGLLAYLITKYRCTYSL-FDYAGLKQTVYNYQEDPKSTLS---FKKNYT 390
Query: 201 FNCAKFILSFSRCAII 154
N + L C ++
Sbjct: 391 PNLSSLKLCMVECEVV 406
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 402 MNLSCASITVFCIAIISSTPVNFSY--LVTKSCTFLVKLSYLNLSATSETFV 253
M L A+ CI ++ T +NF+Y L CT +V L N AT F+
Sbjct: 144 MRLWNAAFGTLCIPLVYFTALNFNYSFLAATLCTLMVALD--NHLATISRFI 193
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 245 VPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVEEIMAIQNT 376
+ +K++ + ++F+ + TKK +L K+ ++ I A++NT
Sbjct: 570 IEMSKLNAIRQQFRKEYQTKKWDELSVKWTDEENMKYISAVENT 613
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 416 RRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQER 559
R+ + +QL+N + +L+ ++ ++ + EE+K+I QER
Sbjct: 332 RKEQLLKQLSNAQEKLEHEQHSRNQKLEAAKQRMDNIREEYKVITQER 379
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = -2
Query: 396 LSCASITVFCIAIISSTPVNFSYLVTKSCTFLVKLSYLNLSATSETFVAGTYLVIS*STF 217
++ + T + +STPV + L T +CT + Y + TS + + + T
Sbjct: 527 VTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPV---TS 583
Query: 216 SRFVTFNC 193
+ T NC
Sbjct: 584 TPVTTTNC 591
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 354 SSTPVNFSYLVTKSCTFLVKLSYLNLSATSETFVAGTYLVIS*STFSRFVTFNC 193
+STPV + L T +CT + Y + TS + + + T + T NC
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPV---TSTPVTTTNC 532
>SPCC1259.01c |rps1802|rps18-2, SPCC825.06c|40S ribosomal protein
S18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 152
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 350 EEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANI 451
+ I+ + NT +D + K + A + + VGR+ ANI
Sbjct: 10 QHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANI 43
>SPBC16D10.11c |rps1801|rps18-1|40S ribosomal protein
S18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 152
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 350 EEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANI 451
+ I+ + NT +D + K + A + + VGR+ ANI
Sbjct: 10 QHILRLLNTNVDGKVKVMFAMTQIKGVGRRYANI 43
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 655 PLPXVAQLHGGRHRGEQLAF 596
P+P L+GGRH G LAF
Sbjct: 148 PVPSFNVLNGGRHAGGDLAF 167
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +2
Query: 263 SEVAERFKYDNLTKKVQDLVTKYEKFTGVEEIMAIQNTV 379
S++ E+F + DL+ K+EK + E+ + N +
Sbjct: 1247 SQLCEKFNVQESLDSIDDLIEKFEKLSSSEKNDNLSNLI 1285
>SPBC776.07 |||mitochondrial Mam33 family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 293 NLTKKVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKF 400
N+++ V D V + + FT E+ +QN A+D+F
Sbjct: 114 NVSQDVTDAVPEEQDFTEFEDEQELQNQGESAEDEF 149
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 26.2 bits (55), Expect = 6.1
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 284 KYDNLTKKVQD--LVTKYEKFTGVEEIMAIQ-NTVIDAQDKFIAAQDRRRDVGRQLANIE 454
K+ N K+ + LV K++K T E +T+ D F A+ + GR++ N+
Sbjct: 4 KFSNFFKEAEHPALVKKFDKSTTDESSSKEDYSTMSDLWKMFSKAKSELSN-GRRVENLT 62
Query: 455 SRLKELHAEMQNTMKGDEKYL 517
RL ++ + T GD L
Sbjct: 63 WRLMSINLQKNLTPNGDSNTL 83
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 371 NTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEM--QNTMKGDEKYLQLCTEEHKL 544
N IDA ++ R + G+ L IES+L + + M Q + +E+ + ++ ++
Sbjct: 484 NKCIDACNEASEVDRREPNTGKNLREIESQLSKCMSAMASQRQNETEEETMARIQKDPEV 543
Query: 545 --IIQERALRTLFADAEKEERELFATM 619
I+Q+ A++ + A + L M
Sbjct: 544 LGILQDPAMQAILGQARENPAALMEHM 570
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 8.1
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 365 IQNTVIDAQDKFIAA-QDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHK 541
+Q+ V +A ++ A+ +D+++ + ++ IE K+ ++ Q +K +KY LC + +
Sbjct: 106 LQDDVENAFTRYAASLKDKKKMI---VSGIEKVHKDKLSKHQALVKAQDKYHYLCKKVNY 162
Query: 542 LIIQERALRTLFADAEKEERELFATMSA 625
+ Q+ L + EK +L T +A
Sbjct: 163 YVSQQNML--FGKELEKNNAKLNKTQNA 188
>SPAC186.05c |||human TMEM165 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 80 IVNLKCIKSLFPPKNNMRKWQTASXIIAQRLKDKINLAQLNVTNREKV 223
+ ++ C K+LF K + + + I L D+ +A + ++ +EKV
Sbjct: 161 VFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEKV 208
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 443 ANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELF 610
+ IE K LH+ +Q EK +++C ++H + +R+L +KEE +LF
Sbjct: 642 SEIEENRKTLHS-LQFGSTFYEKAIEICVDQHACQLCQRSL-------DKEEEKLF 689
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 25.8 bits (54), Expect = 8.1
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 434 RQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERAL--RTLFADAEKEEREL 607
RQL+ I K+ ++ T + + +L +EH +E+A+ + +F+ EK + L
Sbjct: 47 RQLSEINEAQKKAEKSLEQTEARKQNFTELLEKEH----EEQAITEQEIFSFQEKLDAML 102
Query: 608 FATMSAAVKLGHXRERAHAER 670
+ +L H R ++R
Sbjct: 103 KRKQKLSEELDHYRAIISSKR 123
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,165,346
Number of Sequences: 5004
Number of extensions: 62254
Number of successful extensions: 189
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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