BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I22
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189 32 0.52
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 32 0.69
04_01_0261 + 3516461-3516629,3517729-3517823,3518724-3518834,351... 31 1.2
03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,241... 31 1.2
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 31 1.6
09_03_0206 + 13485420-13486439 31 1.6
01_01_0168 + 1433084-1433320,1433432-1434889,1435443-1435496 31 1.6
12_02_1224 + 27158810-27161366,27161593-27161969 30 2.8
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 30 2.8
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 30 2.8
02_05_1056 - 33804717-33804871,33805352-33805418,33805508-338055... 30 2.8
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.8
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 29 3.7
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 29 3.7
07_01_0828 - 6679393-6680432,6680448-6680784 29 6.4
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 6.4
04_01_0301 + 4016588-4016627,4016715-4018837 29 6.4
02_04_0172 - 20595357-20596129,20596994-20597138 29 6.4
08_02_0009 + 11216532-11218687,11220727-11225998 28 8.5
08_02_0008 + 11212351-11214506,11214548-11214584 28 8.5
08_02_0007 + 11208170-11210325,11210367-11210403 28 8.5
08_02_0003 + 11180421-11180757,11180773-11185715 28 8.5
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 28 8.5
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 28 8.5
01_01_0100 - 755894-756662,757086-757598,758718-761050 28 8.5
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 28 8.5
>04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189
Length = 470
Score = 32.3 bits (70), Expect = 0.52
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 380 IDAQDKFIAAQDR-RRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQE 556
+D++ K +R + +G LAN E+ L+ E++ K + ++CTE + I ++
Sbjct: 181 LDSEKKSRRRAERINKKLGMALANTEASLQAATKELERERKSKGRVEKICTELIRGIGED 240
Query: 557 RA-LRTLFADAEKEEREL 607
+A + L + EK + EL
Sbjct: 241 KAEVEALKKETEKAQEEL 258
>01_05_0808 - 25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 31.9 bits (69), Expect = 0.69
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 368 QNTVIDAQDKFI-AAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKL 544
+NT ++ K I D +R GR+ N++ L+E E+ + + D++ ++ E K
Sbjct: 1111 ENTTLNFVQKLIDETPDGQRIEGRE--NVKKTLRETEKEVLHRLDEDKEIYKM--EREKE 1166
Query: 545 IIQERALRTLFADAEKEERELFATMSAAVKLGHXRERAHAE 667
+ER+ R L + E+E ++ ERA AE
Sbjct: 1167 QAKERSRRELEEEKERERERAKDRLAVQRATKEAHERAFAE 1207
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 389 QDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK-YLQLCTEEHKLIIQERAL 565
++K A + RR++ + R K+ A + T + E+ + + + ++ ++ L
Sbjct: 1163 REKEQAKERSRRELEEEKERERERAKDRLAVQRATKEAHERAFAEARAKAERIALERITL 1222
Query: 566 RTLFADAEKEERELFATMSAAVKLGHXRERAHAER 670
A AE E+E AT AA + R AER
Sbjct: 1223 ARQRASAEAREKEEKATAEAATEKASREARLKAER 1257
>04_01_0261 +
3516461-3516629,3517729-3517823,3518724-3518834,
3519179-3519213,3519864-3519954,3520124-3520196,
3521127-3521257,3524325-3524720
Length = 366
Score = 31.1 bits (67), Expect = 1.2
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = +2
Query: 284 KYDNLTKK-VQDLV-TKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIES 457
KY+NLTKK +DL K EK +EI ++ + + +++ I++ G+ L N +
Sbjct: 196 KYENLTKKRNEDLAKLKKEKEDMEKEIRGLRERIKELEEQVISSSSS----GKSLTNNAA 251
Query: 458 RLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKL 637
+N M+G K + L E++K+ + R L+ + K+ +EL ++L
Sbjct: 252 ---------ENIMEGINKQI-LGAEQYKM--ENRDLKRQNKELSKQNKELMEQSKELMEL 299
Query: 638 GHXRERAHAERNK 676
R++ H E K
Sbjct: 300 PALRKK-HEELTK 311
>03_01_0307 +
2414709-2414762,2415769-2415841,2416090-2416154,
2416288-2416365,2416880-2416999,2418021-2418091,
2418808-2418900,2419242-2419311,2420236-2420436,
2421345-2421557,2422354-2422440,2422441-2422652,
2422901-2423042,2423424-2423592,2424050-2424126,
2424393-2424563,2425095-2425171,2425299-2425401,
2426066-2426185,2426301-2426444,2426826-2426975,
2427398-2427541,2427816-2427903,2428672-2428799,
2429329-2429533,2429843-2430015,2430174-2430392,
2430490-2430684
Length = 1213
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAE-MQNTMKGDEKYLQLCTEE 535
M +Q+ V D D + R++ + L+ I S ++ L A+ M NT KGD ++ L TEE
Sbjct: 420 MEVQDFVQDKLDTMLRTTFRKK---KDLSRILSDMRTLSADWMANTSKGDPEHNSLETEE 476
>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
Length = 520
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 296 LTKKVQDLVTK-YEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDV-GRQLANIESRLKE 469
+ K+ Q +V + E+ V ++A + V +AQ + R+ + GR+LA++ K
Sbjct: 395 VVKQQQQIVPEAQEEPCSVGSVLAAASPVTEAQQSSSDRKSRKAEKKGRKLADLFVNWKP 454
Query: 470 LHAEMQNTMKGDEKYLQLC 526
+M++T GD+ +L C
Sbjct: 455 SPTQMEDTDVGDQDWLFSC 473
>09_03_0206 + 13485420-13486439
Length = 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 695 RQRCTNTCCVPRAPSPFXGPASRRPTSWRTTRVLPSRHRR 576
R+ T T PR GP R SWR V P R RR
Sbjct: 45 RRSTTTTTWTPRREPTGGGPRHRAGCSWRRAAVRPHRARR 84
>01_01_0168 + 1433084-1433320,1433432-1434889,1435443-1435496
Length = 582
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = -1
Query: 652 LPXVAQLHGGRHR----GEQLAFFLLGIGEEGP 566
+P V LHGG H G A+F G GE GP
Sbjct: 145 VPTVVHLHGGAHPPQSDGSAFAWFTAGFGETGP 177
>12_02_1224 + 27158810-27161366,27161593-27161969
Length = 977
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 593 PSRHRRRGSAGHVLVL*ACALQCRAASIS 507
P+R R RG AG V V+ CAL C A+++
Sbjct: 591 PARLRMRGLAGSVWVVAVCALVCVVATLA 619
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/107 (19%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N + Y+ T + E
Sbjct: 95 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKRNTSIRFINYKPRTTDDLET 154
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 155 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 201
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 29.9 bits (64), Expect = 2.8
Identities = 30/131 (22%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Frame = +2
Query: 170 LKDKINLAQLNVTNREKVDQLITKYVPATKVSEV-AERFKYDNLTKKVQDLVTKY----E 334
LK +I+ + L TN+ +++ + K A + +E A + T ++Q+L ++ E
Sbjct: 137 LKSRIS-SLLEQTNKAELEVVCLKEALAQQNTEKEAIVLQCQQSTARLQNLKSEILHTQE 195
Query: 335 KFTGV-EEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
KF + EE+ + A ++ + + +++ +L ++ LK+ H E+ N + + +
Sbjct: 196 KFNRLKEEMQSGFQPFTTADERSVLLEKANQEMNLELNKLKHMLKQKHEEL-NEKQAELE 254
Query: 512 YLQLCTEEHKL 544
L + TEE L
Sbjct: 255 KLNISTEEEHL 265
>02_05_1056 -
33804717-33804871,33805352-33805418,33805508-33805576,
33806414-33806548,33806609-33806680,33807281-33807375,
33807778-33807859,33807949-33807999,33808107-33808187,
33808534-33808575,33808705-33808803,33809044-33809115,
33809166-33809270
Length = 374
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 458 RLKELHAEMQNTMKGDEKYLQLCTEEHK----LIIQERALRTLFADAEKEERELFATMSA 625
+LKEL EMQ KG EK Q T K I + L+ ADA+ E R L S
Sbjct: 241 QLKELAEEMQAITKGLEKVEQELTTSEKDGPGSEIFYKKLKEFLADAQAEGRSLAFLYST 300
Query: 626 AVK 634
A K
Sbjct: 301 AGK 303
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 561 PCGPSS-PMPRRKNASCSPRCRPP*SWATKGRGRTRNATSIGTSLP 695
PC PS P P + +P+C PP S+ + G G T + TS P
Sbjct: 49 PCNPSYYPPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPP 94
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYE-KFTGVEEI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ K T E
Sbjct: 181 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPKTTDDLET 240
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 241 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 287
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/102 (21%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +2
Query: 329 YEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQ-LANIESRLKELHAEMQNTMKGD 505
+E V+ + + + + A D ++ ++ R +AN S+L+++HA + ++G
Sbjct: 694 HETDIDVQNVTHVDVSKVRASDISVSRNSQKASETRSDMAN--SQLEQIHASNSSMVRGP 751
Query: 506 EKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAV 631
+ YL+ H + A + AEK + +T +AA+
Sbjct: 752 QSYLEAAL--HNRVYSTSATDIVNTTAEKHGQVEASTNNAAI 791
>07_01_0828 - 6679393-6680432,6680448-6680784
Length = 458
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +2
Query: 173 KDKINLAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYE-KFT 343
K I ++ L ++ E+ + I+ + + +S+ Y N Y+ K T
Sbjct: 223 KGIIFMSPLKISFEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPKTT 282
Query: 344 GVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
E A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 283 DDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 334
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +1
Query: 169 TKGQNKLSAIECNESRKGRSTYYQIRTGYESFGSSGEI*IR*FN*KSTRFSHQI*KIHGS 348
+K QN+ SA + G ++ + T S GSS + + N K++ +S + K +GS
Sbjct: 347 SKNQNQTSAGVASGGSSGTTSKQEETTSQGSVGSSKDHPAQAINSKTSNYSEVLVKGNGS 406
Query: 349 RRNYGDTKHGDRRAGQI 399
K D++ I
Sbjct: 407 STKQASQKQPDKKVDWI 423
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 28.7 bits (61), Expect = 6.4
Identities = 24/124 (19%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Frame = +2
Query: 194 QLNVTNREKVDQLITKYVPATKVSEVAERF---KYDNLTKKVQDLVTKYEKFTGVEEIMA 364
Q + K++ L + V T+ E A + + D +TK+++DL K+E+ ++++
Sbjct: 297 QKQIMFEAKIETLNMELVALTEAKEAAAKACEAQNDEITKELEDLKRKFEELQTNKDLVE 356
Query: 365 IQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKL 544
+N + Q + +A +++ E+++K L+ ++ ++ + + C E
Sbjct: 357 GENDKL--QSEVLAIEEK-------YGQSEAKVKWLNQILRVVVEAKDAAAKACEAEKVE 407
Query: 545 IIQE 556
I++E
Sbjct: 408 ILKE 411
>02_04_0172 - 20595357-20596129,20596994-20597138
Length = 305
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 677 TCCVPRAPSPFXGPASRRPTSWRTTRVLPSRHRRRGSAGHVLVL*ACALQCRA 519
+CC P P+P PA PT V+P R + A H+ + C + RA
Sbjct: 256 SCCKPLCPAPHTPPAPMAPTV-AAVGVVPK--RSKWIAAHIALAGPCHMITRA 305
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ T + E
Sbjct: 230 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPRTTDDLET 289
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 290 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 336
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ T + E
Sbjct: 944 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPRTTDDLET 1003
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 1004 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 1050
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ T + E
Sbjct: 230 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKTRTTDDLET 289
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 290 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 336
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ T + E
Sbjct: 230 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPRTTDDLET 289
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 290 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 336
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ T + E
Sbjct: 228 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPRTTDDLET 287
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 288 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 334
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 326 KYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
KY T E A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 103 KYSGTTDDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 160
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 28.3 bits (60), Expect = 8.5
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Frame = +2
Query: 284 KYDNLTKKVQDLV--TKYEKFTGVE--EIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANI 451
KY + K ++ LV T E + E++ ++ + ID + K + QD R + R+ N
Sbjct: 267 KYRSKIKALETLVNGTNEENEMAINRLEVVKVEKSKIDEKRK-LGEQDMIRLI-REKENA 324
Query: 452 ESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERALRTLFAD 583
E+ + LH EMQ + E++ + + + + + LR A+
Sbjct: 325 ENIIASLHQEMQVMNRMHEQFREQMETKARQMEEHLTLRAKEAE 368
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 188 LAQLNVTNREKVDQ--LITKYVPATKVSEVAERFKYDNLTKKVQDLVTKYEKFTGVE-EI 358
++ L +++ E+ + I+ + + +S+ Y N Y+ T + E
Sbjct: 233 MSPLKISSEERAGEEWKISDLIESKTLSQPENYISYQNSKGNTSIRFINYKPRTTDDLET 292
Query: 359 MAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMK 499
A +ID + ++ + D ++ E++LKE++ E N+MK
Sbjct: 293 EASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMK 339
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 552 KNVPCGPSSPMPRRKNASCSPRCRPP*SWATKGRGRTRN 668
+++P GP+S A+ +P +PP AT G+ T N
Sbjct: 155 QHMPLGPASAAAPPPQAAAAPPAQPPAGGATAGQKLTTN 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,512,528
Number of Sequences: 37544
Number of extensions: 433639
Number of successful extensions: 1363
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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