Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I22
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40802-8|ABQ13044.1| 212|Caenorhabditis elegans Hypothetical pr... 134 8e-32
U40802-7|AAV28321.1| 258|Caenorhabditis elegans Hypothetical pr... 134 8e-32
U40802-6|AAV28320.1| 330|Caenorhabditis elegans Hypothetical pr... 134 8e-32
Z75955-3|CAB00114.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.20
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 32 0.62
U64852-3|ABH03525.1| 740|Caenorhabditis elegans Uncoordinated p... 32 0.62
U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated p... 32 0.62
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 32 0.62
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 32 0.62
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 32 0.62
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 31 1.4
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 29 3.3
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 29 3.3
AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine r... 29 5.7
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 7.6
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 7.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 7.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 7.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 7.6
>U40802-8|ABQ13044.1| 212|Caenorhabditis elegans Hypothetical
protein ZC477.3c protein.
Length = 212
Score = 134 bits (324), Expect = 8e-32
Identities = 64/157 (40%), Positives = 98/157 (62%)
Frame = +2
Query: 305 KVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEM 484
K+ V YE+F GV+ + Q V+ + K AQ RR+ ++ N++SRLKE+H ++
Sbjct: 31 KIDQYVDVYEEFIGVKTVRQAQEEVMRWEKKLSEAQLVRREKQSEINNLQSRLKEIHFDL 90
Query: 485 QNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKLGHXRERAHA 664
T +G++KYLQL TEEH++I +ER L F E ERE F +S V+ H RER A
Sbjct: 91 DRTSRGEDKYLQLLTEEHQIIKKERELLNSFEGLETAEREAFHQLSMRVRSSHERERERA 150
Query: 665 ERNKYWYIVASIXGTVLGIXGSTINNHLKMAEFRDMM 775
E+ K+W + AS+ G +LGI G++I N L+M + ++M+
Sbjct: 151 EKTKWWGVSASLIGALLGIAGTSIGNELRMRKLKEML 187
>U40802-7|AAV28321.1| 258|Caenorhabditis elegans Hypothetical
protein ZC477.3b protein.
Length = 258
Score = 134 bits (324), Expect = 8e-32
Identities = 64/157 (40%), Positives = 98/157 (62%)
Frame = +2
Query: 305 KVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEM 484
K+ V YE+F GV+ + Q V+ + K AQ RR+ ++ N++SRLKE+H ++
Sbjct: 31 KIDQYVDVYEEFIGVKTVRQAQEEVMRWEKKLSEAQLVRREKQSEINNLQSRLKEIHFDL 90
Query: 485 QNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKLGHXRERAHA 664
T +G++KYLQL TEEH++I +ER L F E ERE F +S V+ H RER A
Sbjct: 91 DRTSRGEDKYLQLLTEEHQIIKKERELLNSFEGLETAEREAFHQLSMRVRSSHERERERA 150
Query: 665 ERNKYWYIVASIXGTVLGIXGSTINNHLKMAEFRDMM 775
E+ K+W + AS+ G +LGI G++I N L+M + ++M+
Sbjct: 151 EKTKWWGVSASLIGALLGIAGTSIGNELRMRKLKEML 187
>U40802-6|AAV28320.1| 330|Caenorhabditis elegans Hypothetical
protein ZC477.3a protein.
Length = 330
Score = 134 bits (324), Expect = 8e-32
Identities = 64/157 (40%), Positives = 98/157 (62%)
Frame = +2
Query: 305 KVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEM 484
K+ V YE+F GV+ + Q V+ + K AQ RR+ ++ N++SRLKE+H ++
Sbjct: 31 KIDQYVDVYEEFIGVKTVRQAQEEVMRWEKKLSEAQLVRREKQSEINNLQSRLKEIHFDL 90
Query: 485 QNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKLGHXRERAHA 664
T +G++KYLQL TEEH++I +ER L F E ERE F +S V+ H RER A
Sbjct: 91 DRTSRGEDKYLQLLTEEHQIIKKERELLNSFEGLETAEREAFHQLSMRVRSSHERERERA 150
Query: 665 ERNKYWYIVASIXGTVLGIXGSTINNHLKMAEFRDMM 775
E+ K+W + AS+ G +LGI G++I N L+M + ++M+
Sbjct: 151 EKTKWWGVSASLIGALLGIAGTSIGNELRMRKLKEML 187
>Z75955-3|CAB00114.1| 461|Caenorhabditis elegans Hypothetical
protein R07B7.5 protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 116 VEKDFLCILNSLFPSYEVILANKVKILRIPYSEIV 12
+ K F I+NS+FP + L + V RIPYSE++
Sbjct: 389 LRKKFDTIMNSIFPKSWIPLYSMVTFSRIPYSEVI 423
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 31.9 bits (69), Expect = 0.62
Identities = 31/122 (25%), Positives = 54/122 (44%)
Frame = +2
Query: 146 ASXIIAQRLKDKINLAQLNVTNREKVDQLITKYVPATKVSEVAERFKYDNLTKKVQDLVT 325
AS I R ++K ++ LN D+L + Y+ + E R L + L +
Sbjct: 77 ASTIRDSREREKKEMSDLN-------DRLAS-YIEKVRFLEAQNR----KLAADLDALRS 124
Query: 326 KYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGD 505
K+ K T M V+DAQ +R+D+ QL ++ L E+ ++++ KG
Sbjct: 125 KWGKDTHNIRNMYEGELVVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGR 184
Query: 506 EK 511
E+
Sbjct: 185 EQ 186
>U64852-3|ABH03525.1| 740|Caenorhabditis elegans Uncoordinated
protein 83, isoform c protein.
Length = 740
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 347 VEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLC 526
V++I + +++ + ++ A R+ D+ + IES LKE +M N M DE ++LC
Sbjct: 541 VDKIGKMAHSLSQVKGEWDAWNSRQNDIRNAMVRIESHLKE--GQMDNKMIADE--MELC 596
Query: 527 TE 532
E
Sbjct: 597 QE 598
>U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated
protein 83, isoform b protein.
Length = 975
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 347 VEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLC 526
V++I + +++ + ++ A R+ D+ + IES LKE +M N M DE ++LC
Sbjct: 776 VDKIGKMAHSLSQVKGEWDAWNSRQNDIRNAMVRIESHLKE--GQMDNKMIADE--MELC 831
Query: 527 TE 532
E
Sbjct: 832 QE 833
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 347 VEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLC 526
V++I + +++ + ++ A R+ D+ + IES LKE +M N M DE ++LC
Sbjct: 842 VDKIGKMAHSLSQVKGEWDAWNSRQNDIRNAMVRIESHLKE--GQMDNKMIADE--MELC 897
Query: 527 TE 532
E
Sbjct: 898 QE 899
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +2
Query: 257 KVSEVAERFKYDNLT---KKVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRD 427
++ AE++K D T K++ +L + + +E +++ ++ Q+K + + +
Sbjct: 251 EIEAEAEKWK-DRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQLV--EELNE 307
Query: 428 VGRQLANIESRLKELHAEMQNTMKGDEKYLQLCTEE 535
V ++L IE+ K H ++ +T+ DE+Y Q EE
Sbjct: 308 VQKKLEEIENSQKTFHQKVVSTLNLDEEYFQNPDEE 343
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 31.9 bits (69), Expect = 0.62
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 347 VEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEKYLQLC 526
V++I + +++ + ++ A R+ D+ + IES LKE +M N M DE ++LC
Sbjct: 842 VDKIGKMAHSLSQVKGEWDAWNSRQNDIRNAMVRIESHLKE--GQMDNKMIADE--MELC 897
Query: 527 TE 532
E
Sbjct: 898 QE 899
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 30.7 bits (66), Expect = 1.4
Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 9/178 (5%)
Frame = +2
Query: 128 MRKWQTASXIIAQRLKDKI--NLAQLNVTNREKVDQLITKY-VPATKVSEVAERFKY--D 292
+RKW + +++ + +L +LN K+ +L + + + E AE+F
Sbjct: 937 VRKWLAKRRLRELKIEARSVGHLQKLNTGLENKIIELQMRLDIANARTKEEAEKFATASK 996
Query: 293 NLTKKVQDL-VTKYEKFTGVE---EIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESR 460
NL K DL + + E+ T +E + +Q V + + + +R + ++ ++SR
Sbjct: 997 NLQKTKADLAMMEAERLTLLEARNRVEVLQEEVERLETECDLKEAQRGGMETKMVELQSR 1056
Query: 461 LKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVK 634
L ++ +E T+ + L+ + L +ER + E+ R AA++
Sbjct: 1057 LDQMQSESGQTIVELTEQLEKAKADRVLWDEERQRMEAALNTERSARNALDAEMAAMR 1114
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 284 KYDNLTKKVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRL 463
+Y+ + ++ TK + G++E+ A+++ D + +I AQ + + Q +E+
Sbjct: 218 QYEQKCAEFEEQRTK--NYYGMDEVQAVRSGKTDVES-YIKAQISKSGLSEQ---VEANR 271
Query: 464 KELHAEMQNTM-KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEER 601
KE QN + K + K+ +L EE K +ER + AE EER
Sbjct: 272 KE-----QNYVDKPNNKFKKLTKEEKKAQWEERRRQKDTERAEDEER 313
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 368 QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
+ ++DAQ +R+D+ QL ++ L E+ ++++ KG E+
Sbjct: 112 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ 159
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 368 QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
+ ++DAQ +R+D+ QL ++ L E+ ++++ KG E+
Sbjct: 120 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ 167
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 368 QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
+ ++DAQ +R+D+ QL ++ L E+ ++++ KG E+
Sbjct: 120 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ 167
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 368 QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
+ ++DAQ +R+D+ QL ++ L E+ ++++ KG E+
Sbjct: 112 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ 159
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 368 QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
+ ++DAQ +R+D+ QL ++ L E+ ++++ KG E+
Sbjct: 120 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ 167
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 368 QNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQNTMKGDEK 511
+ ++DAQ +R+D+ QL ++ L E+ ++++ KG E+
Sbjct: 120 EGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ 167
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 437 QLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFAT 616
QLA E R +E EM+ + + + +EH L +Q L E+EE EL AT
Sbjct: 429 QLAEDERRKRE-QKEMKEKAEKERQLRAREEQEHFLAVQREEQAQLEKQREREEAELQAT 487
Query: 617 MS 622
++
Sbjct: 488 LA 489
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 437 QLANIESRLKELHAEMQNTMKGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFAT 616
QLA E R +E EM+ + + + +EH L +Q L E+EE EL AT
Sbjct: 429 QLAEDERRKRE-QKEMKEKAEKERQLRAREEQEHFLAVQREEQAQLEKQREREEAELQAT 487
Query: 617 MS 622
++
Sbjct: 488 LA 489
>AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine
receptor, class t protein5 protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 198 NC-AKFILSFSRCAIIXEAVCHFRILFLGGKRLFMHFKFTI 79
NC A +++ RCA E HF + FL GKR+F+ F +
Sbjct: 123 NCVASILMAMDRCA---EVDPHFPLAFLFGKRIFIIVIFVL 160
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 552 KNVPCGPSSPMPRRKNAS 605
++ PCGP SP+P K AS
Sbjct: 511 RSSPCGPESPIPLEKRAS 528
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily assigned
gene nameprotein 59 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 7.6
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 266 EVAERFKYDNLTKKVQDLVTKYEKFTGVEEIMAIQNTVIDAQDKFI--AAQDRRRDVGRQ 439
E A R + +NLT+K+ V + + + IQNT + + A+ D+ RQ
Sbjct: 757 EKATREEMENLTRKITGEVESLKNNSPLTTSNYIQNTPSGWGSRRMNNVARKDGLDLQRQ 816
Query: 440 L-ANIESRLKELHAEMQNTMKGDEKYL 517
L A I+++LK L AE++N+ E+YL
Sbjct: 817 LQAEIDAKLK-LKAELKNS---QEQYL 839
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 311 QDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQN 490
++L+TKYE+ +E + +++ D+Q K + R +L + LK+LH Q+
Sbjct: 442 KELMTKYEE--SIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQD 499
Query: 491 TMK 499
+ K
Sbjct: 500 SEK 502
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 311 QDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQN 490
++L+TKYE+ +E + +++ D+Q K + R +L + LK+LH Q+
Sbjct: 515 KELMTKYEE--SIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQD 572
Query: 491 TMK 499
+ K
Sbjct: 573 SEK 575
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 311 QDLVTKYEKFTGVEEIMAIQNTVIDAQDKFIAAQDRRRDVGRQLANIESRLKELHAEMQN 490
++L+TKYE+ +E + +++ D+Q K + R +L + LK+LH Q+
Sbjct: 515 KELMTKYEE--SIERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQD 572
Query: 491 TMK 499
+ K
Sbjct: 573 SEK 575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,951,420
Number of Sequences: 27780
Number of extensions: 365058
Number of successful extensions: 1196
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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