Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I22
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    30   0.032
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    30   0.032
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    30   0.032
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    30   0.032
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.8  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   3.7  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   3.7  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   3.7  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   3.7  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +2

Query: 497 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKL-----GHXRERAH 661
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K         R+R  
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 662 AERNKYWYIVASIXGTVL 715
            ER++   I++S+    +
Sbjct: 73  RERSREPKIISSLSNNTI 90


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +2

Query: 497 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKL-----GHXRERAH 661
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K         R+R  
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 662 AERNKYWYIVASIXGTVL 715
            ER++   I++S+    +
Sbjct: 73  RERSREPKIISSLSNNTI 90


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +2

Query: 497 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKL-----GHXRERAH 661
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K         R+R  
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 662 AERNKYWYIVASIXGTVL 715
            ER++   I++S+    +
Sbjct: 73  RERSREPKIISSLSNNTI 90


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +2

Query: 497 KGDEKYLQLCTEEHKLIIQERALRTLFADAEKEERELFATMSAAVKL-----GHXRERAH 661
           K D +Y +LC EE KL ++ER  R  ++ + + E+  +       K         R+R  
Sbjct: 14  KKDRQYEKLCNEEEKL-LEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTE 72

Query: 662 AERNKYWYIVASIXGTVL 715
            ER++   I++S+    +
Sbjct: 73  RERSREPKIISSLSNNTI 90


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 473 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 363
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 473 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 363
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 473 VILSV*ILCWLTXXXXXXXXXXXX*ICPARRSPCFVS 363
           VI+ V ++CWL               CP+ R   F++
Sbjct: 331 VIMGVFVVCWLPFFLMYVIVPFCPDCCPSDRMVYFIT 367


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 327 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 416
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 327 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 416
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 327 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 416
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 327 NMKNSRESKKLWRYKTR*STRRTNSLLPKI 416
           N  + R+ ++ W+ ++R  T R  S  PKI
Sbjct: 52  NENSYRKYRETWKERSRDRTERERSREPKI 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,802
Number of Sequences: 438
Number of extensions: 5468
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)