Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I19
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr...   170   9e-43
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr...   170   9e-43
U51993-1|AAB36851.2|  377|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF022967-10|AAB69875.3|  381|Caenorhabditis elegans Hypothetical...    29   4.2  
Z98877-9|CAB63405.1|  348|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U41028-5|AAA82358.1|  185|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical
           protein W07E11.1 protein.
          Length = 2207

 Score =  170 bits (414), Expect = 9e-43
 Identities = 80/170 (47%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
 Frame = +3

Query: 288 GLYDPQNEHEACGVGFVVAIDGKRSHKIVRDAEVLAKRMEHRGACACDNDTGDGAGVLTA 467
           GL+ PQ E +ACGVGFV +I G  S KI+ DA  + +RM HRGAC CDND+GDGAGVLTA
Sbjct: 48  GLWLPQLERDACGVGFVCSIKGTTSSKIMSDARTMLERMAHRGACGCDNDSGDGAGVLTA 107

Query: 468 IPHQFYCAQLRDSHQIDLPPFGRYATGIFFLDKLHHQDIEAKFLVLAESLGLKVLCWRTV 647
           IP   Y   +++    DLPP G+YATGI FL+   ++  +  F  LA + GL+V+ WR +
Sbjct: 108 IPDDLYRKSVKEQDGSDLPPLGQYATGILFLEAESYKQAKEAFQDLARACGLRVVAWRKL 167

Query: 648 PTKNSSIGQVARNSEPYMRQVFVTGDI--EDETQLSRQIFVLRKRASHEL 791
            T    IG+ A+ +EP +RQVFV+ D    D  +  R +++LRK+A + +
Sbjct: 168 GTNRECIGEEAKKTEPLIRQVFVSADYAESDPAKFERSVYLLRKQAVNSM 217


>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical
           protein W07E11.1 protein.
          Length = 2207

 Score =  170 bits (414), Expect = 9e-43
 Identities = 80/170 (47%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
 Frame = +3

Query: 288 GLYDPQNEHEACGVGFVVAIDGKRSHKIVRDAEVLAKRMEHRGACACDNDTGDGAGVLTA 467
           GL+ PQ E +ACGVGFV +I G  S KI+ DA  + +RM HRGAC CDND+GDGAGVLTA
Sbjct: 48  GLWLPQLERDACGVGFVCSIKGTTSSKIMSDARTMLERMAHRGACGCDNDSGDGAGVLTA 107

Query: 468 IPHQFYCAQLRDSHQIDLPPFGRYATGIFFLDKLHHQDIEAKFLVLAESLGLKVLCWRTV 647
           IP   Y   +++    DLPP G+YATGI FL+   ++  +  F  LA + GL+V+ WR +
Sbjct: 108 IPDDLYRKSVKEQDGSDLPPLGQYATGILFLEAESYKQAKEAFQDLARACGLRVVAWRKL 167

Query: 648 PTKNSSIGQVARNSEPYMRQVFVTGDI--EDETQLSRQIFVLRKRASHEL 791
            T    IG+ A+ +EP +RQVFV+ D    D  +  R +++LRK+A + +
Sbjct: 168 GTNRECIGEEAKKTEPLIRQVFVSADYAESDPAKFERSVYLLRKQAVNSM 217


>U51993-1|AAB36851.2|  377|Caenorhabditis elegans Hypothetical
           protein F56F10.2 protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 591 KFLVLAESLGLKVLCWRTVPTKNSSIGQVARNSEPYMRQVFVTGDI 728
           K+L + + L  K++CW+   T   +  ++AR     +R +F  G++
Sbjct: 112 KYLDIDDLLNCKLVCWKWNATIGENASELARTRTDQIRILFDEGEV 157


>AF022967-10|AAB69875.3|  381|Caenorhabditis elegans Hypothetical
           protein C13A2.3 protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 401 YGAPRCLXXXXXXXXXXXCTDRYPSSILLRSTKRQSPDRFAPLR 532
           YG+ R              T R P  + LRS KRQS + F P+R
Sbjct: 330 YGSLRLAMMFSGFEWVATFTGRSPKRVQLRSQKRQSTNLFNPIR 373


>Z98877-9|CAB63405.1|  348|Caenorhabditis elegans Hypothetical
           protein Y69H2.8 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +2

Query: 470 PSSILLRSTKRQSPDRFAPLRAICDWNLLPRQTASPGHRSQVSSTSRESWS 622
           P S+  R + R++ D F+P+  + D+  L R   S G++     TSRE+ S
Sbjct: 100 PRSLSSRLSSRRNLD-FSPILDLTDFLSLQRTQCSSGNQKCFQQTSREATS 149


>U41028-5|AAA82358.1|  185|Caenorhabditis elegans Hypothetical
           protein C25G6.1 protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 643 PFLQKTAASVRWLVTRSRICVKCLLPAISRTRPSCR 750
           P+   +A   RW+     +   C  P + R RPSCR
Sbjct: 115 PYQDGSAPVKRWVFDFCVVQPACCRPVLGRCRPSCR 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,182,604
Number of Sequences: 27780
Number of extensions: 411110
Number of successful extensions: 1049
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)