Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I18
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60992-1|CAA43306.1| 468|Homo sapiens T cell glycoprotein CD6 p... 31 7.5
U66146-1|AAC51165.1| 592|Homo sapiens CD6e protein. 31 7.5
U66142-1|AAC51161.1| 668|Homo sapiens CD6a protein. 31 7.5
U34623-1|AAA86417.1| 668|Homo sapiens T cell surface glycoprote... 31 7.5
L78838-2|AAL40085.1| 592|Homo sapiens T cell surface glycoprote... 31 7.5
L78838-1|AAL40089.1| 668|Homo sapiens T cell surface glycoprote... 31 7.5
BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein. 31 7.5
BC078669-1|AAH78669.1| 668|Homo sapiens CD6 molecule protein. 31 7.5
BC033755-1|AAH33755.1| 639|Homo sapiens CD6 protein protein. 31 7.5
AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology dom... 31 7.5
AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology dom... 31 7.5
AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein. 31 7.5
>X60992-1|CAA43306.1| 468|Homo sapiens T cell glycoprotein CD6
protein.
Length = 468
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>U66146-1|AAC51165.1| 592|Homo sapiens CD6e protein.
Length = 592
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>U66142-1|AAC51161.1| 668|Homo sapiens CD6a protein.
Length = 668
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>U34623-1|AAA86417.1| 668|Homo sapiens T cell surface glycoprotein
CD6 protein.
Length = 668
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>L78838-2|AAL40085.1| 592|Homo sapiens T cell surface glycoprotein
CD6 isoform e protein.
Length = 592
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>L78838-1|AAL40089.1| 668|Homo sapiens T cell surface glycoprotein
CD6 isoform c protein.
Length = 668
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein.
Length = 1192
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 615 DGWTSPQPIDIYNAINPLLLHGRNGRGGWCL 707
DGW SPQ + +++P +H +G G W L
Sbjct: 864 DGWASPQESSLLRSVSPSQVH--HGSGDWLL 892
>BC078669-1|AAH78669.1| 668|Homo sapiens CD6 molecule protein.
Length = 668
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>BC033755-1|AAH33755.1| 639|Homo sapiens CD6 protein protein.
Length = 639
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 777 IARRYSLPVEVNHEHIXVRIXXVXPAGSN 863
I +Y+LPV VNH+H+ I PAGSN
Sbjct: 426 IKGKYALPVMVNHQHLPTTI----PAGSN 450
>AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 615 DGWTSPQPIDIYNAINPLLLHGRNGRGGWCL 707
DGW SPQ + +++P +H +G G W L
Sbjct: 1057 DGWASPQESSLLRSVSPSQVH--HGSGDWLL 1085
>AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 615 DGWTSPQPIDIYNAINPLLLHGRNGRGGWCL 707
DGW SPQ + +++P +H +G G W L
Sbjct: 1057 DGWASPQESSLLRSVSPSQVH--HGSGDWLL 1085
>AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein.
Length = 1113
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 615 DGWTSPQPIDIYNAINPLLLHGRNGRGGWCL 707
DGW SPQ + +++P +H +G G W L
Sbjct: 785 DGWASPQESSLLRSVSPSQVH--HGSGDWLL 813
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,861,922
Number of Sequences: 237096
Number of extensions: 2262789
Number of successful extensions: 4810
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4810
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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