Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I18
         (896 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061397-1|AAL28945.1|  622|Drosophila melanogaster LD32155p pro...    29   8.6  
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro...    29   8.6  
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote...    29   8.6  
AE014298-1030|AAF46253.1|  622|Drosophila melanogaster CG2079-PA...    29   8.6  
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA...    29   8.6  

>AY061397-1|AAL28945.1|  622|Drosophila melanogaster LD32155p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 168 IPTGTAFYVNRLGRKKTWNPFCQTIKCFR 254
           +PT T F +NR+ +KK  + +C   K  R
Sbjct: 14  VPTQTGFSLNRISKKKACSRYCLLFKASR 42


>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
          Length = 2409

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +3

Query: 585  FDATHFFYCMDGWTSP---QPIDIYN 653
            FDAT +  C+DG T P   QP+D+++
Sbjct: 954  FDATGYLTCIDGHTLPRQCQPLDVFS 979


>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
            protein.
          Length = 2382

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +3

Query: 585  FDATHFFYCMDGWTSP---QPIDIYN 653
            FDAT +  C+DG T P   QP+D+++
Sbjct: 1339 FDATGYLTCIDGHTLPRQCQPLDVFS 1364


>AE014298-1030|AAF46253.1|  622|Drosophila melanogaster CG2079-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 168 IPTGTAFYVNRLGRKKTWNPFCQTIKCFR 254
           +PT T F +NR+ +KK  + +C   K  R
Sbjct: 14  VPTQTGFSLNRISKKKACSRYCLLFKASR 42


>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
            isoform A protein.
          Length = 2786

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +3

Query: 585  FDATHFFYCMDGWTSP---QPIDIYN 653
            FDAT +  C+DG T P   QP+D+++
Sbjct: 1330 FDATGYLTCIDGHTLPRQCQPLDVFS 1355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,974,447
Number of Sequences: 53049
Number of extensions: 647620
Number of successful extensions: 1017
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)