Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I16
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232...    61   1e-09
01_01_0697 - 5389071-5389487,5390301-5390390,5390472-5390536,539...    30   3.1  
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542...    29   5.3  
12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156           28   9.3  
08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-57...    28   9.3  

>04_04_1441 -
           33621423-33622118,33622251-33622315,33623140-33623227,
           33623957-33625570
          Length = 820

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 33/104 (31%), Positives = 49/104 (47%)
 Frame = +1

Query: 340 DFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWF 519
           D  ++WKG+F+  W SDKPL Q  LA  +A  +   P      A     A    L  EW 
Sbjct: 51  DLLKLWKGLFFCFWHSDKPLYQSSLATRLAAGVSSGPSPAA--AAAFFAAYLATLRREWV 108

Query: 520 GIDQHXXDKCLMLARRYLRGSIRCLQRCEWSVDSCNKYAXMLTD 651
            ID H  DK  +L RR+L  +   L    ++ D  ++   +L++
Sbjct: 109 HIDTHRLDKFYLLNRRFLHHAFLLLAANSFAADLTSQVVSILSE 152


>01_01_0697 -
           5389071-5389487,5390301-5390390,5390472-5390536,
           5391106-5391176,5391297-5391335,5392938-5393350
          Length = 364

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 424 IAGILDHFPPEHLHHAMLMTKAGFKVLATEWFG 522
           I G+ +H    +LH A L+T  GF V A +W G
Sbjct: 144 IHGLNEH-SGRYLHFAELLTSCGFGVYAMDWIG 175


>01_01_0703 -
           5425713-5425862,5426302-5426451,5426853-5426964,
           5427120-5427481,5427578-5427712,5427812-5427889,
           5427989-5428174,5428266-5428452,5428552-5428658,
           5428732-5428806,5428885-5429040,5429165-5429437,
           5429548-5429643,5429724-5429814,5429883-5430385
          Length = 886

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +1

Query: 517 FGIDQHXXDKCLMLARRYLRGSIRCLQRCEWSVDSCNKYAXMLTDADGLLSMXTPHYA 690
           F  D H  D    +AR+Y+R  I  +QR   ++ S          A   LS  TP  A
Sbjct: 682 FAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQLSPVTPEAA 739


>12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156
          Length = 598

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 411 PSGEYSRHPGSFSTRTSSSCNAYDKGWL 494
           P GE    PG+ S+R     ++YD GWL
Sbjct: 336 PDGELRPVPGANSSRAIPYFSSYDDGWL 363


>08_01_0081 -
           574119-575204,575794-576191,576321-576382,576581-576653,
           576754-576824,576961-577148,577230-577377,577465-577503,
           577601-577656,577745-577798,577900-578003,578117-578217,
           578726-578796,578912-578968,579306-579422,579653-579682
          Length = 884

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +3

Query: 186 TKKEQVAVVAQEIKFARLLSGNENKVRERVIKTLKKWLQNCFHRV 320
           T  + +A+V   IK   L   +  K    V   LKKW+ NC+  V
Sbjct: 42  TLNDMMAIVPLMIKMLGLNLKDNAKGLASVYDPLKKWMDNCYRGV 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,107,607
Number of Sequences: 37544
Number of extensions: 362234
Number of successful extensions: 768
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)