Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I16
(938 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U79775-1|AAC51625.1| 461|Homo sapiens NNP-1/Nop52 protein. 79 3e-14
BC014787-1|AAH14787.2| 466|Homo sapiens RRP1 protein protein. 79 3e-14
BC000380-1|AAH00380.1| 461|Homo sapiens ribosomal RNA processin... 79 3e-14
AP001752-4|BAA95542.1| 461|Homo sapiens NNP-1/Nop52 (NNP-1), no... 79 3e-14
AK223215-1|BAD96935.1| 461|Homo sapiens nucleolar protein NOP52... 79 3e-14
AK223185-1|BAD96905.1| 461|Homo sapiens nucleolar protein NOP52... 79 3e-14
BC028386-1|AAH28386.1| 758|Homo sapiens ribosomal RNA processin... 75 5e-13
BC014005-1|AAH14005.1| 408|Homo sapiens RRP1B protein protein. 75 5e-13
D80001-1|BAA11496.1| 762|Homo sapiens KIAA0179 protein. 42 0.002
>U79775-1|AAC51625.1| 461|Homo sapiens NNP-1/Nop52 protein.
Length = 461
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F D+ +VWKG+FY MWM DKPL+QE+L I+ ++ F H L +A ++ +
Sbjct: 47 FTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMN 104
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R L S++ L+ W
Sbjct: 105 REWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 138
>BC014787-1|AAH14787.2| 466|Homo sapiens RRP1 protein protein.
Length = 466
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F D+ +VWKG+FY MWM DKPL+QE+L I+ ++ F H L +A ++ +
Sbjct: 52 FTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMN 109
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R L S++ L+ W
Sbjct: 110 REWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 143
>BC000380-1|AAH00380.1| 461|Homo sapiens ribosomal RNA processing 1
homolog (S. cerevisiae) protein.
Length = 461
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F D+ +VWKG+FY MWM DKPL+QE+L I+ ++ F H L +A ++ +
Sbjct: 47 FTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMN 104
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R L S++ L+ W
Sbjct: 105 REWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 138
>AP001752-4|BAA95542.1| 461|Homo sapiens NNP-1/Nop52 (NNP-1), novel
nuclear protein 1 protein.
Length = 461
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F D+ +VWKG+FY MWM DKPL+QE+L I+ ++ F H L +A ++ +
Sbjct: 47 FTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMN 104
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R L S++ L+ W
Sbjct: 105 REWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 138
>AK223215-1|BAD96935.1| 461|Homo sapiens nucleolar protein NOP52
variant protein.
Length = 461
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F D+ +VWKG+FY MWM DKPL+QE+L I+ ++ F H L +A ++ +
Sbjct: 47 FTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMN 104
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R L S++ L+ W
Sbjct: 105 REWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 138
>AK223185-1|BAD96905.1| 461|Homo sapiens nucleolar protein NOP52
variant protein.
Length = 461
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F D+ +VWKG+FY MWM DKPL+QE+L I+ ++ F H L +A ++ +
Sbjct: 47 FTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMN 104
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R L S++ L+ W
Sbjct: 105 REWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 138
>BC028386-1|AAH28386.1| 758|Homo sapiens ribosomal RNA processing 1
homolog B (S. cerevisiae) protein.
Length = 758
Score = 74.5 bits (175), Expect = 5e-13
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F +++ ++WKG+FY MW+ D+PL+QE+LA IA ++ H + T ++ +
Sbjct: 46 FSQEELLKIWKGLFYCMWVQDEPLLQEELANTIAQLVHAVNNSAAQHLFIQT--FWQTMN 103
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R LR S L+R W
Sbjct: 104 REWKGIDRLRLDKYYMLIRLVLRQSFEVLKRNGW 137
>BC014005-1|AAH14005.1| 408|Homo sapiens RRP1B protein protein.
Length = 408
Score = 74.5 bits (175), Expect = 5e-13
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +1
Query: 328 FKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLA 507
F +++ ++WKG+FY MW+ D+PL+QE+LA IA ++ H + T ++ +
Sbjct: 46 FSQEELLKIWKGLFYCMWVQDEPLLQEELANTIAQLVHAVNNSAAQHLFIQT--FWQTMN 103
Query: 508 TEWFGIDQHXXDKCLMLARRYLRGSIRCLQRCEW 609
EW GID+ DK ML R LR S L+R W
Sbjct: 104 REWKGIDRLRLDKYYMLIRLVLRQSFEVLKRNGW 137
>D80001-1|BAA11496.1| 762|Homo sapiens KIAA0179 protein.
Length = 762
Score = 42.3 bits (95), Expect = 0.002
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = +1
Query: 385 SDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHXXDKCLMLAR 564
S + L+QE+LA IA ++ H + T ++ + EW GID+ DK ML R
Sbjct: 69 SQEELLQEELANTIAQLVHAVNNSAAQHLFIQTF--WQTMNREWKGIDRLRLDKYYMLIR 126
Query: 565 RYLRGSIRCLQRCEW 609
LR S L+R W
Sbjct: 127 LVLRQSFEVLKRNGW 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,602,327
Number of Sequences: 237096
Number of extensions: 2051974
Number of successful extensions: 4022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4014
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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