Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I15
(868 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.006
03_02_0484 + 8805053-8805538 39 0.006
03_02_0483 - 8804021-8804485 39 0.006
03_02_0478 + 8775892-8776377 37 0.018
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.055
01_01_0229 - 1943473-1943922 35 0.073
01_01_0231 + 1951047-1951499 35 0.097
11_02_0041 - 7669692-7670312 34 0.17
02_02_0077 - 6586638-6587165 34 0.17
02_05_0494 + 29486960-29487454 33 0.22
01_01_0227 + 1933247-1933699 33 0.39
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 2.1
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 30 2.8
12_02_0665 + 21670956-21671834,21672563-21672583 29 4.8
04_01_0609 + 7966263-7966366,7967945-7968706,7972607-7972851,797... 29 4.8
01_05_0796 - 25297792-25298514 29 6.4
12_01_0061 + 514798-515967 28 8.4
07_03_1108 - 24034163-24034816,24034914-24035273,24035367-24035909 28 8.4
07_03_0725 + 20991640-20992471,20993308-20993418,20993542-209937... 28 8.4
05_03_0029 - 7525408-7525634,7526253-7526457 28 8.4
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 28 8.4
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 588
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 588
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 588
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.018
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 582
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.055
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 579
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.073
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 579
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 579
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 481 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 588
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_02_0077 - 6586638-6587165
Length = 175
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 481 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPTPSRERER 612
+F+RR+ LPE A + V + DGVLT+T +K P P ++ R
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKK-PPPEPKKPR 158
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 478 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 582
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 475 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 582
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 410 VFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRD 312
+F ++S GE+C ++ T+N+ +SA + R+ D
Sbjct: 401 LFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -1
Query: 532 PQSQAPRLQAARNVGRTA-LKYTRARLSSLRACLPP--RCTRRQSSPKSLPARSAARPD* 362
P+ Q P + R ++ RA + + C+ P R R L A +A+
Sbjct: 598 PRKQMPEFETTRYFNLAGFVEQLRALAAEVGYCITPEYRVVRNFEDKGVLEALWSAKSSP 657
Query: 361 LGTCPCRPL 335
GTCP RPL
Sbjct: 658 YGTCPSRPL 666
>12_02_0665 + 21670956-21671834,21672563-21672583
Length = 299
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 484 FVRRYALPEGAAPETVESRLSSDGVL--TITAPRKVPTPSRERERCPSHRPV 633
F+RR LP A+P SR+SS L + PR +P + PSH PV
Sbjct: 24 FLRRGILPSPASPLPFASRVSSAAPLRHRLPPPRFSLSPIPKTLSSPSHVPV 75
>04_01_0609 +
7966263-7966366,7967945-7968706,7972607-7972851,
7976940-7977107,7977471-7977734,7977962-7978509
Length = 696
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 140 KRHLRLYLNRN-GKTQRKVRLNASQFDSLTQITSN 39
KR LR Y NRN G+ + ++++ + L QIT N
Sbjct: 448 KRKLRAYFNRNGGQLLKSIKIDIYTKEKLDQITKN 482
>01_05_0796 - 25297792-25298514
Length = 240
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -1
Query: 532 PQSQAPRLQAARNVGRTALKYTRARLSSLRACLPPRCTRRQSSPKSLPARSA 377
P APR + VGR + TRA LR RC RR+ S S A A
Sbjct: 130 PARAAPRRSRSEKVGR-GRRPTRAASPELRRSESERCRRRRRSLSSSSASLA 180
>12_01_0061 + 514798-515967
Length = 389
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 676 SWVPSLWSLISLRTGPVCAMGTFLSPLTAS 587
SW PS +LISL +G CA F S + A+
Sbjct: 295 SWSPSKLNLISLGSGRFCAAKIFRSNMPAA 324
>07_03_1108 - 24034163-24034816,24034914-24035273,24035367-24035909
Length = 518
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 641 ANGTGLCDGHLSLSLDGVGTFLGAVMVRTPSDDSRDSTVSGAAPSGS 501
A G G S +G G ++ + RTPS S + + A+P GS
Sbjct: 94 AAGGDFAGGEESARREGFGRWVRGQLARTPSVASSAAAAAAASPGGS 140
>07_03_0725 +
20991640-20992471,20993308-20993418,20993542-20993739,
20993860-20993891,20993943-20994153,20994806-20995043,
20995507-20995657,20996171-20996533
Length = 711
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 205 DQDFGLALTPNDMLAAVACPVLSEDYFRPWRQLAAASRD 321
D+ FGLAL DM A AC F+ R L RD
Sbjct: 75 DRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRD 113
>05_03_0029 - 7525408-7525634,7526253-7526457
Length = 143
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -2
Query: 417 VGSLHRNLFRREVLHVQIDLELVLVGL---YAGAEVTRCSRELSPRSEVVFGEHWTGDGS 247
V S R R + +IDL+L G Y EV R RE R FG GDG+
Sbjct: 11 VDSRERKKLRNQSKPPRIDLQLRSHGQARSYVRHEVARRKRERR-RDGYTFGSDSNGDGA 69
Query: 246 QHVVRG*RQSEILINKTTG 190
VR R + +L+ G
Sbjct: 70 NGSVRVERWAPVLVPAMRG 88
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 433 PPRCTRRQSSPKSLPARSAARP 368
P R TRR++SP S PA AA P
Sbjct: 94 PARSTRRKTSPGSSPASVAAAP 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,647,438
Number of Sequences: 37544
Number of extensions: 457875
Number of successful extensions: 1534
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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