Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I13
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174...    31   1.5  
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376...    29   4.5  
06_01_0883 + 6768998-6769381,6769518-6769616,6769664-6769726,677...    28   7.8  

>04_01_0150 +
           1741639-1741742,1742432-1742543,1742856-1743594,
           1743724-1743776,1743914-1743991,1744107-1744405,
           1744660-1745476,1745576-1745842,1745987-1746181,
           1746287-1746372,1746469-1746657,1747138-1747207,
           1747399-1747552,1747706-1747832,1749158-1749254
          Length = 1128

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 225 IKKLLYGANMRSVMGAXLLPTATFPKSDPIIVRTSD 332
           +K L   + M  VM   LL  A +PKS PI+V   D
Sbjct: 879 LKSLFAASEMTIVMPVKLLVPADYPKSSPILVDNDD 914


>05_04_0124 +
           18232961-18236636,18236810-18237288,18237549-18237629,
           18238033-18238041,18238096-18238248
          Length = 1465

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = -3

Query: 154 DILKTEPHY*KHIRYLYLVLSCDIKFFNIN*KHLENTQILRI 29
           +I   EP Y KH+RYL L  S DIK        L N QIL +
Sbjct: 580 EIFSVEPAYMKHLRYLDL-SSSDIKTLPEAVSALYNLQILML 620


>06_01_0883 +
           6768998-6769381,6769518-6769616,6769664-6769726,
           6770883-6770931,6771338-6771405,6771463-6771715,
           6772244-6772380,6772708-6772821,6773059-6773258,
           6773367-6773561,6773650-6773812
          Length = 574

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 276 LLPTATFPKSDPIIVRTSDTLLYALKNSSGI 368
           L+P  T P    + V T+ TLL+A++N+S I
Sbjct: 428 LIPEVTVPVWGVVYVPTTITLLHAIRNTSSI 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,696,835
Number of Sequences: 37544
Number of extensions: 310460
Number of successful extensions: 575
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)