Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I13
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical ... 30 2.3
AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical... 30 2.3
AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical ... 29 4.0
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 9.3
U67954-8|AAB52608.2| 782|Caenorhabditis elegans Sulfate permeas... 28 9.3
AY954524-1|AAX34432.2| 762|Caenorhabditis elegans anion transpo... 28 9.3
AY887909-1|AAX34421.1| 782|Caenorhabditis elegans anion transpo... 28 9.3
>AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 143 FQNVGSFIRECNGTTLRYDQACLS-ILTDQEVTIWSQY 253
FQ++ +F CN T+ + Q L+ L D++ + W+QY
Sbjct: 167 FQSISAFAPICNPITVPWGQKALTGYLGDEDKSTWNQY 204
>AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 143 FQNVGSFIRECNGTTLRYDQACLS-ILTDQEVTIWSQY 253
FQ++ +F CN T+ + Q L+ L D++ + W+QY
Sbjct: 167 FQSISAFAPICNPITVPWGQKALTGYLGDEDKSTWNQY 204
>AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical
protein K10C9.3 protein.
Length = 279
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 143 FQNVGSFIRECNGTTLRYDQACLSILTDQEVTIW 244
F+N GS+ + C GT +D+ + + D+ V +W
Sbjct: 66 FEN-GSYPQNCRGTPRHFDENLIKSIEDRLVVVW 98
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 274 FAPITLRILAPYSNFLIGQNTQTRLVVTQRSTIALSN 164
F P L ++ P+ + L+G TR ++ S I LSN
Sbjct: 380 FFPALLFLIPPWLSLLLGPMAITRCIILMTSLILLSN 416
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 309 PIIVRTSDTLLYALKNSSGIICKGS 383
P I R SD ++ ALKN S + C GS
Sbjct: 1542 PTISRNSDDIVTALKNISTMSCPGS 1566
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 309 PIIVRTSDTLLYALKNSSGIICKGS 383
P I R SD ++ ALKN S + C GS
Sbjct: 1542 PTISRNSDDIVTALKNISTMSCPGS 1566
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 309 PIIVRTSDTLLYALKNSSGIICKGS 383
P I R SD ++ ALKN S + C GS
Sbjct: 1542 PTISRNSDDIVTALKNISTMSCPGS 1566
>U67954-8|AAB52608.2| 782|Caenorhabditis elegans Sulfate permease
family protein 3 protein.
Length = 782
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 176 NGTTLRYDQACLSILTDQ-EVTIWSQYAECDGCKXAANSNVPEV*SDYSPHLRHSALRSE 352
N R D + +D+ +++W + + CK + + ++ SD S + S L+S
Sbjct: 555 NVCIFRMDAPLIFTSSDRFTMSVWQCVKKWERCKSESFVTIEQMNSDRSADIFDSKLKSA 614
Query: 353 KQQWNNMQR 379
+++W Q+
Sbjct: 615 RRRWKRDQK 623
>AY954524-1|AAX34432.2| 762|Caenorhabditis elegans anion
transporter SULP-3b protein.
Length = 762
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 176 NGTTLRYDQACLSILTDQ-EVTIWSQYAECDGCKXAANSNVPEV*SDYSPHLRHSALRSE 352
N R D + +D+ +++W + + CK + + ++ SD S + S L+S
Sbjct: 535 NVCIFRMDAPLIFTSSDRFTMSVWQCVKKWERCKSESFVTIEQMNSDRSADIFDSKLKSA 594
Query: 353 KQQWNNMQR 379
+++W Q+
Sbjct: 595 RRRWKRDQK 603
>AY887909-1|AAX34421.1| 782|Caenorhabditis elegans anion
transporter SULP-3a protein.
Length = 782
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 176 NGTTLRYDQACLSILTDQ-EVTIWSQYAECDGCKXAANSNVPEV*SDYSPHLRHSALRSE 352
N R D + +D+ +++W + + CK + + ++ SD S + S L+S
Sbjct: 555 NVCIFRMDAPLIFTSSDRFTMSVWQCVKKWERCKSESFVTIEQMNSDRSADIFDSKLKSA 614
Query: 353 KQQWNNMQR 379
+++W Q+
Sbjct: 615 RRRWKRDQK 623
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,608,049
Number of Sequences: 27780
Number of extensions: 270411
Number of successful extensions: 506
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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