Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I09
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77133-5|CAO82039.1|  237|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical p...    29   5.7  
U41108-3|AAK39157.2|  443|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z77133-5|CAO82039.1|  237|Caenorhabditis elegans Hypothetical
           protein K03A11.6 protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = -1

Query: 430 FINNIELKWSRRRRTDDALSQHSSSNTNRLSILQNKQTDIPSSMYGREVTVTVLTHKPIR 251
           F N +E    R     DAL ++S   TN ++       D  + +YG  VTV     +P+ 
Sbjct: 13  FFNGVEAVLDRNCTHMDALGKYS---TNAVNCENTYSDDACTMIYGSSVTVGTTVERPLL 69

Query: 250 NKVTGGE 230
             +  GE
Sbjct: 70  CFMLNGE 76


>U49830-13|AAK31474.1|  826|Caenorhabditis elegans Hypothetical
           protein C33F10.2 protein.
          Length = 826

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +2

Query: 29  ILKIYEQMTMKREYGQQDLSHIINMYHVPDEQRYAAVGERTMPLI 163
           IL+IY  ++++ E  + +   I+N Y+  D+++ + V E  + L+
Sbjct: 188 ILQIYLGISLEAEVTETEYLEILNKYYTDDQEKLSTVMEDLIQLL 232


>U41108-3|AAK39157.2|  443|Caenorhabditis elegans Hypothetical
           protein C08D8.1 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = -1

Query: 874 FFFFFFSXLXXSXIENVIFPSIYFCVX*LNNTHCTFSYYNIF*SFQEYYYFRFIITNILY 695
           FFF FFS    S +   I  S+        N H    YY+ F ++  + +  F+ T I+ 
Sbjct: 18  FFFNFFSFFTLSALSQTIVESV--AEEKGINRHA--GYYSAFLTYLVFTFGHFVATPIVE 73

Query: 694 NARRAWSVAS 665
                WS+ S
Sbjct: 74  IITPKWSIVS 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,203,397
Number of Sequences: 27780
Number of extensions: 410972
Number of successful extensions: 1097
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)