Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I08
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81086-9|CAD30440.1|   75|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical...    28   7.3  

>Z81086-9|CAD30440.1|   75|Caenorhabditis elegans Hypothetical
           protein F53B6.9 protein.
          Length = 75

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 520 SHPQYEQYAGPQYGAPQHGYDPYYG 594
           SH  +  + G  YG    GY PYYG
Sbjct: 31  SHEHHHHHHGGYYGGGYGGYQPYYG 55


>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
           protein Y6B3B.1 protein.
          Length = 1829

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = +3

Query: 216 YSDLDEEDQHLFRAAYDTPSYDHEEQEDNEISLXQAGLVERRSLGCEGETERIKSI*QSP 395
           +SD + +D  +  A  D P    E ++ + +      +++ + L  EG  E      Q  
Sbjct: 657 HSDKESKDPQVIDANMDRPDQGSESKDPSPLESKDHQVLKVKILPREGSVESKNHQAQEA 716

Query: 396 RREHALHQIKAKGTAE 443
              H  H  ++KGT +
Sbjct: 717 GMVHPAHGSESKGTED 732


>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
           protein Y6B3B.1 protein.
          Length = 1829

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = +3

Query: 216 YSDLDEEDQHLFRAAYDTPSYDHEEQEDNEISLXQAGLVERRSLGCEGETERIKSI*QSP 395
           +SD + +D  +  A  D P    E ++ + +      +++ + L  EG  E      Q  
Sbjct: 657 HSDKESKDPQVIDANMDRPDQGSESKDPSPLESKDHQVLKVKILPREGSVESKNHQAQEA 716

Query: 396 RREHALHQIKAKGTAE 443
              H  H  ++KGT +
Sbjct: 717 GMVHPAHGSESKGTED 732


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,405,874
Number of Sequences: 27780
Number of extensions: 295578
Number of successful extensions: 825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)