Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_I05
(866 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 30 3.6
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 30 3.6
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 30 3.6
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 6.3
AE014297-1608|AAN14337.2| 198|Drosophila melanogaster CG17327-P... 29 6.3
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 6.3
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 6.3
BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p pro... 29 8.3
AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-P... 29 8.3
>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
EG:95B7.8,FBgn0000928;fs(1)Yb protein.
Length = 1042
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +3
Query: 543 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 710
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 711 FETVYGAVEXTHXHRR-RVXGDPRLSCSELRSTAXA 815
F+ + + + + + + P +S E S+A A
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSIEEPVSSASA 315
>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
protein.
Length = 1042
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +3
Query: 543 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 710
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 711 FETVYGAVEXTHXHRR-RVXGDPRLSCSELRSTAXA 815
F+ + + + + + + P +S E S+A A
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSIEEPVSSASA 315
>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
protein.
Length = 1042
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +3
Query: 543 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 710
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 711 FETVYGAVEXTHXHRR-RVXGDPRLSCSELRSTAXA 815
F+ + + + + + + P +S E S+A A
Sbjct: 280 FQELVKSFKVQNVFKNMNLPPPPSVSIEEPVSSASA 315
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 579 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 734
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>AE014297-1608|AAN14337.2| 198|Drosophila melanogaster CG17327-PB,
isoform B protein.
Length = 198
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -3
Query: 762 LCGGVNAXTRQHHKPFRIPAAVLQWAARSQKDLKLEPLPGVVGPRVQ 622
LC G N +H P AAR Q L+ LPG GPRV+
Sbjct: 110 LCAG-NQAAERHSAALVSPGTAEDSAARGQ--LRAAKLPGATGPRVE 153
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 579 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 734
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 579 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 734
++DLP + E + ++ D PP A++ PF S LR G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222
>BT023033-1|AAY55449.1| 186|Drosophila melanogaster IP04035p
protein.
Length = 186
Score = 29.1 bits (62), Expect = 8.3
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 124 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 303
++ L ++ LH ++ +NGA + P N + H +T+ +I Q +R
Sbjct: 41 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97
Query: 304 VRRSHGLRPSICSLTMSAVCCSKL 375
GLR IC L C L
Sbjct: 98 GHTRQGLRCRICKLNAHGDCAPNL 121
>AE013599-2059|AAF58136.1| 165|Drosophila melanogaster CG12959-PA
protein.
Length = 165
Score = 29.1 bits (62), Expect = 8.3
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 124 VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNIIRHQSLWTFIRIRGTKSLQQ*VR 303
++ L ++ LH ++ +NGA + P N + H +T+ +I Q +R
Sbjct: 27 LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83
Query: 304 VRRSHGLRPSICSLTMSAVCCSKL 375
GLR IC L C L
Sbjct: 84 GHTRQGLRCRICKLNAHGDCAPNL 107
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,469,171
Number of Sequences: 53049
Number of extensions: 725114
Number of successful extensions: 1917
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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