Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I04
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41625-2|ABS19463.1|  584|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U41625-1|AAA83325.2|  586|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81512-6|CAB04171.3|  455|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U80954-4|AAB38097.2|  426|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF125952-8|AAD14692.1|  349|Caenorhabditis elegans Seven tm rece...    28   7.5  
AC006722-14|AAK68413.1|  349|Caenorhabditis elegans Seven tm rec...    28   7.5  
Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AF038623-6|AAB94154.1|  388|Caenorhabditis elegans Hypothetical ...    28   9.9  

>U41625-2|ABS19463.1|  584|Caenorhabditis elegans Hypothetical
           protein K03A1.2b protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +2

Query: 581 LEYNKNTIVDNE-----EDSTKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKI 730
           + YN+   +DN+      + TKL L++  L  V + + D   N +  LD+ +N+I
Sbjct: 211 VSYNEIRFIDNDVFKPFTNLTKLYLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRI 265


>U41625-1|AAA83325.2|  586|Caenorhabditis elegans Hypothetical
           protein K03A1.2a protein.
          Length = 586

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +2

Query: 581 LEYNKNTIVDNE-----EDSTKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKI 730
           + YN+   +DN+      + TKL L++  L  V + + D   N +  LD+ +N+I
Sbjct: 211 VSYNEIRFIDNDVFKPFTNLTKLYLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRI 265


>Z81512-6|CAB04171.3|  455|Caenorhabditis elegans Hypothetical
           protein F25C8.2 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 9/19 (47%), Positives = 18/19 (94%)
 Frame = +2

Query: 662 VPRTIVDKFSNHIKYLDIS 718
           VP+ I+DKF+++I+YL+++
Sbjct: 106 VPKKILDKFNDYIRYLNVA 124


>Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical
           protein K07A12.2 protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 626 TKLTLAYEWLYEVPRTIVDKFSNHIKYLDISHNKITNLDPLVHFFHLSSLIAD 784
           T L L +  ++++     DK S  + +LD+S+NKI+     V    +S+++ D
Sbjct: 392 TTLDLGHNKIHDIEEGTFDKLSK-LFWLDLSNNKISGFKTSVFKKKISNILLD 443


>U80954-4|AAB38097.2|  426|Caenorhabditis elegans Hypothetical
           protein T07F8.2 protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 667 WHFIQPFIGQSQFCRVLFIVHNSIFI 590
           +HF+  F+  S  CR +F++ NS+ I
Sbjct: 90  YHFLPHFMLDSNSCRAMFVLENSVKI 115


>AF125952-8|AAD14692.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 76 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 FYYILKMHSNLSPSMLYVGSKGR 528
           FYY LKMH N+   +L   SK R
Sbjct: 215 FYYGLKMHFNMKQQLLKFSSKNR 237


>AC006722-14|AAK68413.1|  349|Caenorhabditis elegans Seven tm
           receptor protein 265 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 FYYILKMHSNLSPSMLYVGSKGR 528
           FYY LKMH N+   +L   SK R
Sbjct: 215 FYYGLKMHFNMKQQLLKFSSKNR 237


>Z19157-3|CAA79566.3|  395|Caenorhabditis elegans Hypothetical
           protein ZC84.4 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = -1

Query: 733 RNFIVAYIQIFYVIGKFIHYCPWHFIQPFIGQSQFCRVLFIVHNSIFIIF*RCIATFLQV 554
           R ++ +    F V+G  I+    + + P +    F   + +  + +F IF  C+   + +
Sbjct: 26  RTYVASTYISFNVVGFVINAWVLYVVAPLL----FAPAIKVPKSILFYIFALCVGDLMTM 81

Query: 553 CCMLVLKGGIVVTLWQLKL*SDVC 482
             ML+L   +V   WQ    S VC
Sbjct: 82  IAMLLLVIELVFGTWQFS--SMVC 103


>AF038623-6|AAB94154.1|  388|Caenorhabditis elegans Hypothetical
           protein T08B6.2 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 388 SHYIS*FNVRFDINLNEQEIIFNTRYM 468
           SH++   NVRFD+   E+EI+F+  Y+
Sbjct: 99  SHFLVFANVRFDVR-QEEEILFHYSYL 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,207,511
Number of Sequences: 27780
Number of extensions: 379639
Number of successful extensions: 793
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)