Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_I03
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089275-1|AAL90013.1|  315|Drosophila melanogaster AT07689p pro...    34   0.30 
AE014296-1602|AAF50307.2|  315|Drosophila melanogaster CG4477-PB...    34   0.30 
AY071357-1|AAL48979.1|  565|Drosophila melanogaster RE39378p pro...    33   0.39 
AE014297-677|AAF54170.1|  565|Drosophila melanogaster CG2791-PA ...    33   0.39 

>AY089275-1|AAL90013.1|  315|Drosophila melanogaster AT07689p
           protein.
          Length = 315

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -3

Query: 425 GVNERCTGGTLGISFVTTSAHCDCIKMQVMMARNIAMIAQNIMIRQNWTRRQT 267
           G N  C+G  L   FV TSAHC   K +V+++  + +I    + R  +   +T
Sbjct: 67  GDNHFCSGVILAPMFVMTSAHCLINKRRVLISSRVLLIVAGTLNRLKYIPNRT 119


>AE014296-1602|AAF50307.2|  315|Drosophila melanogaster CG4477-PB
           protein.
          Length = 315

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -3

Query: 425 GVNERCTGGTLGISFVTTSAHCDCIKMQVMMARNIAMIAQNIMIRQNWTRRQT 267
           G N  C+G  L   FV TSAHC   K +V+++  + +I    + R  +   +T
Sbjct: 67  GDNHFCSGVILAPMFVMTSAHCLINKRRVLISSRVLLIVAGTLNRLKYIPNRT 119


>AY071357-1|AAL48979.1|  565|Drosophila melanogaster RE39378p
           protein.
          Length = 565

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 220 FRPLTQEEVLQARQEVVWRRVQFCLIIMFWAI-IAMFLAIITCILMQSQCA 369
           F  +++EE+++   +  W R+++   + FWAI + M +  I  I+   +CA
Sbjct: 60  FTGMSKEELMKYANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIGAPKCA 110


>AE014297-677|AAF54170.1|  565|Drosophila melanogaster CG2791-PA
           protein.
          Length = 565

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 220 FRPLTQEEVLQARQEVVWRRVQFCLIIMFWAI-IAMFLAIITCILMQSQCA 369
           F  +++EE+++   +  W R+++   + FWAI + M +  I  I+   +CA
Sbjct: 60  FTGMSKEELMKYANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIGAPKCA 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,854,252
Number of Sequences: 53049
Number of extensions: 675908
Number of successful extensions: 1944
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)