Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_H21
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 34 0.17
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 33 0.23
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 32 0.70
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 31 0.93
04_01_0180 + 2034021-2034023,2034741-2035088 31 1.6
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 30 2.1
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 30 2.1
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 29 3.8
02_04_0315 - 21969416-21970756 29 5.0
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 29 6.6
08_02_0776 - 21083181-21083187,21083256-21083683,21083800-210840... 29 6.6
05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824 29 6.6
03_01_0476 - 3660327-3661261,3661401-3661668 29 6.6
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 8.7
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 28 8.7
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 28 8.7
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 360 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 539
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 540 KKVSSNVQETNE 575
+N Q +
Sbjct: 575 NLFVTNSQRVKK 586
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696
Query: 549 SSNVQETNEKLA 584
+N +++A
Sbjct: 697 ETNPYTVTKRVA 708
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 31.9 bits (69), Expect = 0.70
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 429 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 271
P R SA T+ WP L A+ +R L AL+CC + S PS L++C S
Sbjct: 99 PGLRASAPTLR---WPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 31.5 bits (68), Expect = 0.93
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 563
K+ +QS ERT E + KAH ++ K E +QAA +QE Q VQ
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQ 475
Query: 564 ET 569
T
Sbjct: 476 AT 477
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 390 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 512
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 345 RVSRGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 521
++ G L D N G+A AL ++E EEL K D++ L K + V
Sbjct: 189 QLMEGHLSDPNAGEASGALVSKDDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVF 248
Query: 522 ESQKLAKKVSSNVQETNEKL 581
+ LAK V E + +L
Sbjct: 249 QIACLAKLPPEEVGEASYEL 268
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 390 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ-AAVQ--NTVQESQKLAKKVSSNV 560
+AL + +ER AEE R AH + A +L+ AV+ N + Q+ A + SS
Sbjct: 400 QALREELATVERRAEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSSSRA 459
Query: 561 QETNEKLA 584
E K+A
Sbjct: 460 MELEHKVA 467
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 357 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 497
G GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 44 GEKGDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>02_04_0315 - 21969416-21970756
Length = 446
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL 536
D NG + ALE++ + + E L A + K A+ EK ++A++ QE++ L
Sbjct: 246 DENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAMEALRQENESL 300
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 486 EKLQAAVQNTVQESQKLAKKVSSNVQETN 572
EKLQ + + QE+Q+L KK+SS ++ ++
Sbjct: 153 EKLQKEISSLSQENQELKKKISSVLENSD 181
>08_02_0776 -
21083181-21083187,21083256-21083683,21083800-21084048,
21084172-21084248,21084351-21084483
Length = 297
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 366 GDANGKAKEAL-EQSRQNIERTAEELRKAHPDVE-KNATALREKLQAA-VQNTVQESQKL 536
GD++G AKE L + SR ++ E RK +E K LR + Q +Q+ ++ +Q++
Sbjct: 120 GDSDGDAKEGLRDSSRSMVQMQREVQRKLQEQIEVKRHLQLRMEAQGRYLQSVLRRAQQV 179
>05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824
Length = 200
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 366 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G G +K+ +++ +R +E A + A +EK QAA + + +Q K
Sbjct: 24 GQVMGASKDKASEAK---DRASEAAGHAAGKGQDTKEATKEKAQAAKERASETAQAAKDK 80
Query: 546 VSSNVQETNEKLA 584
SS Q +K A
Sbjct: 81 TSSTSQAARDKAA 93
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/73 (21%), Positives = 34/73 (46%)
Frame = +3
Query: 351 SRGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 530
++GA G+A +A++A ++++ E E + H ++ + K++ + E
Sbjct: 128 AKGAAGEATRRAEQAKHKTKEAAEAAGERGAEVHEQSKQG----KAKVEETAKEKAGEGY 183
Query: 531 KLAKKVSSNVQET 569
AK + QET
Sbjct: 184 DAAKDKAGKAQET 196
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 375 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 554
+G ++ LE+ R+ IER AEE + + E+ A A R + + +E + A++
Sbjct: 193 SGPSRVTLERLREGIERRAEE-EERRAEEERRAEAERAAAEERARREEEEGRARAEEERR 251
Query: 555 NVQETNEK 578
+E +
Sbjct: 252 RREEERRR 259
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 357 GALGDANGK---AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES 527
G +A GK A+EA E++ + + A ELRK + + ATA RE L+A + +
Sbjct: 156 GRREEAEGKLRAAEEAAERAGKEAQEHAAELRKHRAALAELATARRE-LEAELARAARRG 214
Query: 528 QKLAKKVSSNVQETNE 575
++ ++ +E
Sbjct: 215 DAAEAELGEALERRDE 230
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 447 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSC 325
PC P P R ++T + PW R R + W L C
Sbjct: 26 PCTTPAPRMRSLSATTTRRPWRTGWRGRPMRWASLVVMKLC 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,434,112
Number of Sequences: 37544
Number of extensions: 309330
Number of successful extensions: 1406
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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