Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_H21
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 37 0.022
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 37 0.022
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.022
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.022
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.12
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 32 0.47
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 32 0.47
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 32 0.63
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 32 0.63
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 32 0.63
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 0.83
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.83
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.83
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.83
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 31 0.83
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 31 0.83
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 31 0.83
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.83
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 31 0.83
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 30 1.9
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 29 3.3
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 29 3.3
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 29 3.3
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.3
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.3
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.3
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.3
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 29 4.4
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 29 4.4
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 29 4.4
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 29 5.8
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 29 5.8
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 29 5.8
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 29 5.8
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 28 7.7
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 7.7
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 7.7
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 7.7
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 418 EETRAKIS 425
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K E L++ + + +E+LRK V+ + ++ VQE +KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 561 QETNEKLA 584
+ET K++
Sbjct: 2604 EETRAKIS 2611
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 384 AKEALEQSRQNIERTAEELRKAHPDVEKNATALRE-KLQAAVQNT-----VQESQKLAKK 545
AKEAL +QN ER EL+K ++++ +E K + A +N+ VQE+Q L +K
Sbjct: 178 AKEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRATGAVQEAQVLQEK 237
Query: 546 VSSNVQETNEK 578
+ ++ +EK
Sbjct: 238 LQQALKALDEK 248
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLA 539
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 540 KKVSSNVQE 566
++ + V++
Sbjct: 1759 NELKNAVEQ 1767
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 561 QETNEKL 581
+ E L
Sbjct: 1094 KRKEEDL 1100
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESQKLA 539
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E +++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 540 KKVSSNVQE 566
++ + V++
Sbjct: 1759 NELKNAVEQ 1767
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 560
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 561 QETNEKL 581
+ E L
Sbjct: 1094 KRKEEDL 1100
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 363 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 509
+G A E +Q N+ + ++ K H DV+ ++ALR L A Q
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQ 72
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 366 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G ++G K+ ++++ + A++ +++KN TAL EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 546 VSSNVQETNEKL 581
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 366 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKK 545
G ++G K+ ++++ + A++ +++KN TAL EKL+A + Q KK
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 546 VSSNVQETNEKL 581
+ N++ NEKL
Sbjct: 70 DAENLKLINEKL 81
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 393 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ------AAVQNTVQESQKLAKKVSS 554
+L++ + + E+T L K +EK+ LRE+ Q A VQ ESQ+ ++
Sbjct: 141 SLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQKQASMNAEVQKKELESQERLSVLNK 200
Query: 555 NVQETNEK 578
E NEK
Sbjct: 201 QFMEENEK 208
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 396 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 575
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 576 KL 581
K+
Sbjct: 786 KI 787
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 396 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 575
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + K+ SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 576 KL 581
K+
Sbjct: 786 KI 787
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 548
D A+E + Q + +ER EELR D +K T + L A ++ + KL +K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELR----DTQKKMTQTGDDLDKAQEDLSAATSKLEEK- 74
Query: 549 SSNVQETNEKLA 584
VQE ++A
Sbjct: 75 EKTVQEAEAEVA 86
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 411 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEK 578
+N+++ A+ ++K KN + +K + + QK+ KK + NVQ+ +K
Sbjct: 1276 KNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQKMCKK 1331
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 354 RGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQK 533
+ L +A K E + + + + E+ A + A R+K + A + +QE++
Sbjct: 1380 KSLLAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEAED 1439
Query: 534 LAKKVSSNVQETNE 575
+ K+++ V T E
Sbjct: 1440 VQKELTDVVAATRE 1453
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 354 RGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQK 533
+ L +A K E + + + + E+ A + A R+K + A + +QE++
Sbjct: 1380 KSLLAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEAED 1439
Query: 534 LAKKVSSNVQETNE 575
+ K+++ V T E
Sbjct: 1440 VQKELTDVVAATRE 1453
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +3
Query: 354 RGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQK 533
+ L +A K E + + + + E+ A + A R+K + A + +QE++
Sbjct: 1380 KSLLAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKAIQEAED 1439
Query: 534 LAKKVSSNVQETNE 575
+ K+++ V T E
Sbjct: 1440 VQKELTDVVAATRE 1453
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAK 542
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 446
Query: 543 K 545
+
Sbjct: 447 Q 447
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAK 542
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 446
Query: 543 K 545
+
Sbjct: 447 Q 447
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAK 542
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 147 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 206
Query: 543 K 545
+
Sbjct: 207 Q 207
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 369 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESQKLAK 542
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+ + K
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHK 446
Query: 543 K 545
+
Sbjct: 447 Q 447
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Frame = +3
Query: 396 LEQSRQNIERT-------AEELRKAHPDVEKNATALREKLQAAVQNT-----VQESQKLA 539
+EQSRQ E EE ++ +++ +A R + Q ++ N+ VQ+ QKL
Sbjct: 72 MEQSRQQSEAMISQMKTQTEEFQRIVQELKDDADERRNRAQTSLDNSEYETLVQQRQKLI 131
Query: 540 KKVSSNVQETNEKL 581
+ + QET E+L
Sbjct: 132 ENSEKSQQETKEQL 145
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 381 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 530
K+K+ SR+N ++TAE++ ++ D K A ++ + + Q V+ +
Sbjct: 94 KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVKSEE 143
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 351 SRGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 467
S G+LG+ + + L + +Q++ER A+ELR ++++
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDR 94
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 351 SRGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 467
S G+LG+ + + L + +Q++ER A+ELR ++++
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDR 94
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 223
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 357 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA---TALREKLQAAVQNTVQES 527
G LG A K K LE+S +++ + D+++N T+LREK + ++ +
Sbjct: 14 GVLGPAAKKQKR-LEKSFDQLKKDNDAYVLEIDDLKENIKDQTSLREKAENLNESLKTKV 72
Query: 528 QKLAKKVSS 554
+ LAKKV S
Sbjct: 73 EDLAKKVDS 81
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 566
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 556 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 605
Query: 567 TNEKL 581
+ E++
Sbjct: 606 SEEEM 610
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 566
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 556 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 605
Query: 567 TNEKL 581
+ E++
Sbjct: 606 SEEEM 610
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 387 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 566
KE ++ ++ E T E ++A ++ EKL AA++NT KL ++VS V++
Sbjct: 601 KETSQREQKVAELTTLERKEARDQIQM------EKLDAAIENTT----KLTEQVSDAVEK 650
Query: 567 TNEKL 581
+ E++
Sbjct: 651 SEEEM 655
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 143 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 235
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,695
Number of Sequences: 27780
Number of extensions: 238502
Number of successful extensions: 1011
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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