BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_H18
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 61 1e-09
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 59 5e-09
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 57 2e-08
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 51 1e-06
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 49 4e-06
04_04_0385 - 24858580-24858721,24858772-24858850,24859155-248593... 49 4e-06
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 48 8e-06
02_04_0575 - 24000191-24000302,24000710-24000788,24001017-240011... 47 2e-05
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 46 3e-05
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 46 3e-05
10_08_0151 - 15229235-15229243,15230032-15230103,15230369-152304... 45 7e-05
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 43 4e-04
07_01_0023 - 154119-154541,154697-154741,154875-154922,156104-15... 39 0.005
03_06_0105 + 31675083-31675313,31676171-31676815 33 0.23
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963... 30 2.1
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 30 2.1
12_01_0313 + 2388488-2388560,2389285-2389462,2390221-2390331,239... 30 2.8
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 30 2.8
04_04_1294 - 32424762-32426309 29 3.7
12_02_0404 - 18633355-18633783,18634215-18634232 29 4.9
09_01_0095 - 1403586-1403987,1406687-1406722,1406995-1407012,140... 29 4.9
07_03_0511 - 18911673-18911713,18922395-18923361,18926841-189276... 29 4.9
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 29 6.5
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 29 6.5
06_01_0417 - 2972877-2973876,2973946-2974851,2975823-2976616,297... 29 6.5
02_02_0643 + 12590928-12592172,12592609-12592698 29 6.5
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 28 8.6
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 8.6
05_05_0339 + 24213179-24213821,24214402-24214623,24215035-242152... 28 8.6
01_07_0128 + 41238510-41239146,41239420-41239461,41240076-412402... 28 8.6
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +3
Query: 276 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 455
EL I+ QVEYYF D NL D FL+ + + GWVP+ + FNRL K+T D +I A
Sbjct: 327 ELRAKILTQVEYYFSDSNLDHDNFLKSLMD-EHGWVPISKVADFNRLKKMTTDIQLIVEA 385
Query: 456 LNKST 470
L S+
Sbjct: 386 LANSS 390
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 276 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIAN 452
EL I++QVEYYF D NL D+FL + +K + G+VP+ ++ F R+ KL++D +I
Sbjct: 86 ELCDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEA 145
Query: 453 ALNKSTSWII 482
AL S+ ++
Sbjct: 146 ALRTSSKLVV 155
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 291 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 470
+++Q+EYYF D NL +D FL+ + D GWVPL ++ FN++ KLT + I + +ST
Sbjct: 311 LLKQIEYYFSDDNLCKDIFLRRHMD-DQGWVPLPLIAGFNQVKKLTNNVQFILETVLQST 369
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +3
Query: 201 EDKEVTVETNGQEENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLD-DG 377
E++E V+ + E + + E+ I +QVEYYF D+NL + L I D +G
Sbjct: 94 EEQEAEVDPDATEAAEPLVDGFPD-EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEG 152
Query: 378 WVPLEILTKFNRLAKLTEDTDVIANALNKSTSWII 482
+VP+ ++ FN++ L + ++A AL S+ ++
Sbjct: 153 YVPITVIAGFNKIKALVHNNSMLAAALRTSSKLVV 187
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +3
Query: 264 EDETELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLA 419
+D+ L I Q+E+YF NL D FL+ Q+ D GWV ++++TKFNR A
Sbjct: 415 QDQQNLQEDIRTQIEFYFSTNNLCHDTFLRRQMD-DQGWVHIDVITKFNREA 465
>04_04_0385 -
24858580-24858721,24858772-24858850,24859155-24859302,
24859939-24860239,24860327-24860407,24860727-24860875,
24861073-24861215,24861404-24861556,24861664-24861742,
24861851-24861916
Length = 446
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/94 (31%), Positives = 55/94 (58%)
Frame = +1
Query: 469 RAGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 648
R+ L V+ED KKV R+ E L ++ +E+ +++ +R+I A F + L+D+ ++F Q+
Sbjct: 90 RSSALRVTEDGKKVGRSIE--LSKL-DEIMEQVDSRTIAASPFPYNVKLEDVQSFFAQYG 146
Query: 649 EVENVIMRRYVEKSTKKRLFKGSVFATFKTREQA 750
+V +V + R++ KR F G+ F E+A
Sbjct: 147 KVNSVRLPRHI---ADKRHFCGTALVEFSEEEEA 177
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAK-LTEDTDVIANALNK 464
++RQVE+YF D NL RD FL++ + + +DG V L ++ F+R+ K L D DV + +
Sbjct: 19 VLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDLDVKQETMPE 78
Query: 465 ST 470
T
Sbjct: 79 ET 80
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 48.4 bits (110), Expect = 8e-06
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 288 AIIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNK 464
A++ +VEYYF D+NL + L I D +G+VP+ ++ F ++ L + ++A+AL
Sbjct: 144 AVVPKVEYYFSDINLATTEHLMRFITKDPEGYVPISVVAGFKKIKALIQSNAMLASALRT 203
Query: 465 STSWII 482
S+ ++
Sbjct: 204 SSKLVV 209
>02_04_0575 -
24000191-24000302,24000710-24000788,24001017-24001164,
24001704-24002100,24002188-24002268,24002688-24002836,
24003152-24003294,24003643-24003795,24003912-24003990,
24004113-24004175
Length = 467
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +3
Query: 288 AIIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRL 416
+++RQVE+YF D NL RDKFL+E + + +DG V L ++ F R+
Sbjct: 17 SVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARM 60
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 291 IIRQVEYYFGDVNLHRDKFLQE-QIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 467
+++QVE+YF DVNL + L + I+ +G+VP+ ++ F ++ +L + +A L S
Sbjct: 111 VVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLRTS 170
Query: 468 TSWII 482
++
Sbjct: 171 AELVV 175
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +3
Query: 237 EENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRL 416
+ + + E D + +++Q+E+YF NL D FL+ + D GWV + ++ FN++
Sbjct: 221 QPDPEPEPDADPQQHRANLLKQIEFYFSKDNLCTDVFLRRNMD-DQGWVNIALIAGFNKV 279
Query: 417 AKLTEDTDVIANALNKST 470
+ T+D I + + S+
Sbjct: 280 QESTDDLQYIKDTIQSSS 297
>10_08_0151 -
15229235-15229243,15230032-15230103,15230369-15230459,
15230553-15230695,15231910-15232022,15232171-15232315
Length = 190
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 276 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 455
E + I Q+EYYF + NL D +L+ + GWVPL ++ F R+ LT D + + +
Sbjct: 120 EREKKIREQIEYYFSENNLCSDVYLKGWMN-QQGWVPLTLVAGFPRVQALTTDYETVQRS 178
Query: 456 LNKST 470
+ ST
Sbjct: 179 VLSST 183
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 282 DIA--IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIAN 452
DIA II+QVEY F D NL + FL + + D + +VP+ +++ + ++ + ++ N
Sbjct: 112 DIAQKIIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVN 171
Query: 453 ALNKSTSWII 482
AL S+ ++
Sbjct: 172 ALRTSSKLVV 181
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 439 MSSQMPLTNLR-AGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASL 615
+++Q+ + LR + L VS+D KKVRR QP E ++E E+ +R + A+ +D++
Sbjct: 164 VTNQLLVNALRTSSKLVVSDDGKKVRR--AQPFTERHKE---ELQSRMVIAENLPEDSTR 218
Query: 616 DDLLNYFKQFQEVENV 663
+ L F V+N+
Sbjct: 219 NSLEKIFGIIGSVKNI 234
>07_01_0023 -
154119-154541,154697-154741,154875-154922,156104-156185,
156365-156444,156606-156677,156827-156921,157479-157515
Length = 293
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 442 SSQMPLTNLRAGL-LEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLD 618
++QM + LR L VS+D KKVRR QP E ++E E+ +R I A+ +D+S +
Sbjct: 30 TNQMLVKALRTSTKLIVSDDGKKVRR--RQPFTEKHKE---ELQSRMIIAENLPEDSSRN 84
Query: 619 DLLNYFKQFQEVENVIMRRYVEKSTKK 699
L F V+N+ M E ST +
Sbjct: 85 SLEKIFGVVGSVKNIKMCHPQEPSTAR 111
>03_06_0105 + 31675083-31675313,31676171-31676815
Length = 291
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/126 (18%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +1
Query: 430 RTQMSSQMPLTNLRAGLLEVSEDNKKVRRNPEQP-LPEMNEELRKE--ICNRSIYAKGFA 600
R +MP R ++V ++ P + N+ ++K I + ++ G
Sbjct: 61 RALADDEMPNHVFRGRKVDVKRAERRHDHKQTSPSIKNQNDSVQKNQFIFQKKVFVGGLH 120
Query: 601 KDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 780
+ ++ DL++YF++F + + ++ R ++T + +G F +F + E K + + H
Sbjct: 121 ETVTVKDLISYFEKFGTITDAVVMR--NRTTNRA--RGFGFISFDSHEAVCKILLNRFHN 176
Query: 781 YGDNEL 798
++
Sbjct: 177 LNGRDV 182
>03_02_0865 -
11895257-11895340,11896004-11896069,11896297-11896355,
11896470-11896557,11897158-11897328,11897406-11897564,
11897653-11897835,11897931-11898012,11898753-11898959,
11899099-11899170,11901948-11902055,11902460-11902506
Length = 441
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 580 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKF 759
+Y K AKD DD F E ++ K ++ +G F TF + E A++
Sbjct: 354 LYIKNLAKDVIQDDFYYVFGSVFENMDIARSSLSIKLMQEGRMRGQAFVTFPSVELAQRA 413
Query: 760 MN 765
+N
Sbjct: 414 LN 415
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 571 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQA 750
N+ I+ ++A+ +DL +YF +F I+ Y+ K K+ +G F TF A
Sbjct: 238 NKKIFVGRLPQEANTEDLRHYFGKFGR----IVDAYIPKDPKRSGHRGFGFVTFADEGVA 293
Query: 751 EK 756
++
Sbjct: 294 DR 295
>12_01_0313 +
2388488-2388560,2389285-2389462,2390221-2390331,
2391280-2391362,2391826-2392027,2392078-2392101,
2392234-2392408,2392482-2392683,2393897-2394036
Length = 395
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 165 TCFLKSEEIKMTEDKEVTVETNGQEE-NAKTENSEDETEL 281
T + ++++++E+K+ T+E N +++ +A TE +DE L
Sbjct: 120 TMYKSHQQLQVSEEKDTTIEENSEKKWHAHTEIEDDENVL 159
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 466 LRAGLLEVSEDNKKVRRNPEQPLP--EMNEELRKEICN-RSIYAKGFAKDASLDDLLNYF 636
L A L E E+NK R + P+P + E N R + +G +D + LLN
Sbjct: 1277 LEAKLAEALEENKMYRAQQKSPMPDGQCAAGNGNESSNERVLQLEGELRDMK-ERLLNMS 1335
Query: 637 KQFQEVENVIMRRYVE-KSTKK 699
Q+ EVE R +E K+TKK
Sbjct: 1336 LQYAEVEAQRERLVMELKATKK 1357
>04_04_1294 - 32424762-32426309
Length = 515
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +1
Query: 574 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAE 753
R I+ D +D L YF QF E+E + +K+T K KG +K+ E A
Sbjct: 230 RKIFVGNVHADVDVDRLYEYFSQFGEIEEGPLG--FDKTTGKP--KGFALFVYKSVESAR 285
Query: 754 KFMNAKGHKYGDNELLHSGRKI 819
+ + + D ++L+ + I
Sbjct: 286 RALEEPTRNF-DGKMLNVQKAI 306
>12_02_0404 - 18633355-18633783,18634215-18634232
Length = 148
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 138 YILTSKPQ*TCFLKSEEIKMTEDKEVTVETNGQEENAKTENSEDE-TELDIAII 296
YI TS+P + + K E +E + + EE + EN+EDE TE ++A++
Sbjct: 93 YIETSEPLNIYKEEDNKDKKEEAEESSSSSLKDEEEEEEENNEDEDTEEEVAVV 146
>09_01_0095 -
1403586-1403987,1406687-1406722,1406995-1407012,
1407331-1407513
Length = 212
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 156 PQ*TCFLKSEEIKMTEDKEVTVETNGQEENA 248
PQ + EEI M ++ V V+ N QEEN+
Sbjct: 73 PQLAIGARDEEISMAPEEPVLVDNNNQEENS 103
>07_03_0511 -
18911673-18911713,18922395-18923361,18926841-18927659,
18928152-18928757
Length = 810
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 413 PCQTDRGHRCHRKCP*QIYELDYWRFLKITKK*DVI 520
P +++ GH RK +EL YW FL + DV+
Sbjct: 287 PIESEDGHAAMRKKNSIFWELPYWEFLDVRHAIDVM 322
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 502 KKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEV 654
KK NPE P+P +E++++E+ + A L++ + + Q++
Sbjct: 468 KKFEENPEAPVPSADEDVKQEMAANPLAAISAPLGFYLENAIQALQAIQKI 518
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 577 SIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEK 756
++Y K K S +DLLN F F + + I+ R + + R F F F+ E A
Sbjct: 241 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMR--DANGLSRCFG---FVNFEKSECARN 295
Query: 757 FM-NAKGHKYGD 789
+ N G GD
Sbjct: 296 AVKNLNGKSIGD 307
>06_01_0417 -
2972877-2973876,2973946-2974851,2975823-2976616,
2977887-2977977,2978305-2978384
Length = 956
Score = 28.7 bits (61), Expect = 6.5
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +1
Query: 532 LPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFK 711
+ ++E +E+ + I+ GFA D S D +F+EV N ++++ +
Sbjct: 376 IQRLSETTSRELFFKKIF--GFADDKSPTD------EFEEVSNSVLKK-CGGLPLAIVNI 426
Query: 712 GSVFA--TFKTREQAEKFMNAKGHKYGDNELLHSGRKILT 825
GS+ A T +T+E+ +K N G + +N L +++LT
Sbjct: 427 GSLLASKTNRTKEEWQKVCNNLGSELENNPTLEGVKQVLT 466
>02_02_0643 + 12590928-12592172,12592609-12592698
Length = 444
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 454 PLTNLRAGLLEVSEDNK-KVRRNPEQPLPEMNEELRK 561
P N R G L +S NK ++RRNP +PE E L +
Sbjct: 228 PKANDRHGELTMSSVNKYQLRRNPRPTMPEPGEVLAR 264
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 174 LKSEEIKMTEDKEVTVETNGQEENAKTENSEDETE 278
++ EE++ ED VE +EE+ + E DETE
Sbjct: 47 IEEEEVEEDEDVVEEVEEVDEEEDEEEEEESDETE 81
>08_02_0243 -
14708055-14708416,14708487-14709324,14709482-14710323,
14710466-14710520,14711535-14711549,14713030-14713033,
14713340-14713424,14714045-14714084
Length = 746
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 451 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFT 323
F + + S+S RRL +++ + P+S +C+ R+L T
Sbjct: 635 FRLDELDSLSKIRRLLLIKLEKASPPASPVLCNKRHLKELGLT 677
>05_05_0339 +
24213179-24213821,24214402-24214623,24215035-24215282,
24215385-24215524,24215579-24215753
Length = 475
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 288 AIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 458
A ++ VE GD L+ D+ L++ L+ PL L L + D D++ N L
Sbjct: 106 AYLKYVEARLGDRTLYADEILRDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVINGL 162
>01_07_0128 +
41238510-41239146,41239420-41239461,41240076-41240297,
41240909-41241156,41241296-41241435,41241904-41242027
Length = 470
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 288 AIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 458
A ++ VE GD L+ D+ L++ L+ PL L L + D D++ N L
Sbjct: 104 AYLKYVEARLGDRTLYADEILRDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGL 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,117,480
Number of Sequences: 37544
Number of extensions: 346958
Number of successful extensions: 1115
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -