Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_H18
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 107 8e-24
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 53 3e-07
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 53 3e-07
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 52 7e-07
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 52 7e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 35 0.067
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 35 0.067
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 34 0.12
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 0.83
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 0.83
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 31 1.4
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 30 2.5
AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical ... 30 2.5
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 3.3
AF067947-3|AAC19231.1| 451|Caenorhabditis elegans Hypothetical ... 29 3.3
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 5.8
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 29 5.8
AF039713-1|AAB96725.1| 268|Caenorhabditis elegans Hypothetical ... 29 5.8
Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF040657-4|AAB95053.1| 261|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 107 bits (258), Expect = 8e-24
Identities = 54/112 (48%), Positives = 76/112 (67%)
Frame = +1
Query: 463 NLRAGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQ 642
N +G++ VSEDN+K+RRN E P+PE + E ++I +R++Y KGF+ D LDD++ + Q
Sbjct: 73 NSGSGIISVSEDNQKIRRNEENPVPENSLEYWQKIKHRTVYMKGFSTDTQLDDIIQWANQ 132
Query: 643 FQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHKYGDNEL 798
F E ENV+MRR R FKGSVF T+KTRE+AE A+ K+G+ EL
Sbjct: 133 FGETENVLMRRL---KPGDRTFKGSVFITYKTREEAEAAQKAE-VKFGETEL 180
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +3
Query: 276 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 455
+ D II+Q+EYYFG++NL RDKFLQE++K DDGWVP+ + FNRLA +++DT+ IANA
Sbjct: 11 DADQKIIKQLEYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANA 70
Query: 456 LNKSTSWII 482
+ S S II
Sbjct: 71 VKNSGSGII 79
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +3
Query: 276 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 455
E+ + Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I A
Sbjct: 137 EIKQLLKNQLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEA 195
Query: 456 LNKSTS 473
L +ST+
Sbjct: 196 LKESTN 201
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +3
Query: 276 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 455
E+ + Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I A
Sbjct: 39 EIKQLLKNQLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEA 97
Query: 456 LNKSTS 473
L +ST+
Sbjct: 98 LKESTN 103
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 297 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 470
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 329 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDST 385
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 297 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 470
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 526 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDST 582
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/95 (23%), Positives = 50/95 (52%)
Frame = +1
Query: 496 DNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 675
D KK+ +P+ P+ + + + ++ G + ++L+D+ YF+ + +VE+ ++
Sbjct: 111 DGKKI--DPKVAFPKRTQA-KLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML-- 165
Query: 676 YVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 780
+K+T++ +G F TF + E A+K H+
Sbjct: 166 MFDKATQRH--RGFGFVTFDSDEVADKVCEIHFHE 198
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/95 (23%), Positives = 50/95 (52%)
Frame = +1
Query: 496 DNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 675
D KK+ +P+ P+ + + + ++ G + ++L+D+ YF+ + +VE+ ++
Sbjct: 111 DGKKI--DPKVAFPKRTQA-KLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML-- 165
Query: 676 YVEKSTKKRLFKGSVFATFKTREQAEKFMNAKGHK 780
+K+T++ +G F TF + E A+K H+
Sbjct: 166 MFDKATQRH--RGFGFVTFDSDEVADKVCEIHFHE 198
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.12
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Frame = +3
Query: 66 GNNSIKHVFFNLKAISLKLSGLTLYILTSKPQ*TCFLKSEEIKMTEDKEVTVETNGQEEN 245
G +S+ V + K + ++ + + +++S+ + + + +E + ED E E +EE
Sbjct: 644 GESSVVTVKYTPK-MDVQKKKVEIPVISSESEEEEYEEEDEYEEYEDDEDEDEYYEEEEE 702
Query: 246 AKTENSEDETELDIA-----IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFN 410
+ E+ + TE + II Q F D + + +E IK D +L
Sbjct: 703 NEVEDDDFLTETQLEELMEQIILQTSVMFRDQRMKKFGLEKEMIKFDGATDEEILLQAEQ 762
Query: 411 RLAKLTEDTDVIANAL 458
+LAK+TE +N L
Sbjct: 763 KLAKITETLKTTSNKL 778
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 562 EICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTR 741
E+ I+ GF + +L +F++F V++V M + ++ +K G F TF+T
Sbjct: 62 ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSK-----GYGFITFETE 116
Query: 742 EQAEK 756
+QAE+
Sbjct: 117 DQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 562 EICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTR 741
E+ I+ GF + +L +F++F V++V M + ++ +K G F TF+T
Sbjct: 63 ELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSK-----GYGFITFETE 117
Query: 742 EQAEK 756
+QAE+
Sbjct: 118 DQAEE 122
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 174 LKSEEIKMTEDKEVTVETNGQEENAKTENSEDETELDIAIIRQVE 308
+KS+ K+TE ++ ETNG+ ++ + SE +EL+ + R+ +
Sbjct: 162 MKSKISKLTESEKKLKETNGKVTKSRNQLSERVSELEAQLKREAD 206
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 580 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAEK 756
I+ G S L YF+QF ++E ++ +++T+K +G F T K R AE+
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVV--ITDRNTQKS--RGYGFVTMKDRASAER 91
>AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical
protein F17A9.4 protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 526 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKR 702
QP+P E+++ +I +R +YA FA + D + + ++ ++ +T KR
Sbjct: 160 QPVPLSTEQIKTQIIDRFVYAAKFAYETGFDGV-----ELHGAHGYLLAQFTSPTTNKR 213
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 511 RRNPEQPLPEMNEELRKEICNRS--IYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 675
R + QP EL K I R + GF KD +L+D++ +F ++ N I R
Sbjct: 849 RGDDSQPSQSELMELIKSIGPRGTVLSCNGFPKDVTLEDVVEFFNDYEPDRNSIRIR 905
>AF067947-3|AAC19231.1| 451|Caenorhabditis elegans Hypothetical
protein T10B5.8 protein.
Length = 451
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 526 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRL 705
+P P E++ E+ +R +YA FA + D + Q ++ ++ +T KR+
Sbjct: 160 KPKPLSTEQVETEVVDRFVYAAKFAYECGFDGI-----QLHGAHGYLLSQFTSPTTNKRV 214
Query: 706 FK 711
K
Sbjct: 215 DK 216
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 451 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSP-K*YSTCR 296
F TS SS +L V++ + P + + +C N S C+++S + Y CR
Sbjct: 613 FCTTSSSSSNLCSAGQTVQLDSSNQPINCLVSTCPNNSFCQYSSSGQRYVCCR 665
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +1
Query: 463 NLRAGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQ 642
NL E E + ++ R E ++ E RK N+ K K ++ N+FK
Sbjct: 99 NLEIKQAEAMEIDAELERQVEMEADKLEREHRK---NQKNLKKEEKKQEKQQEMENFFKV 155
Query: 643 FQEVENVIMRRYVEKST 693
F+E+ ++ +E+ +
Sbjct: 156 FEEIRSLAWSELMEQES 172
>AF039713-1|AAB96725.1| 268|Caenorhabditis elegans Hypothetical
protein F57B10.8 protein.
Length = 268
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 183 EEIKMTEDKEVTVETNGQEENAKTENSEDET-ELDIAIIRQVE 308
E++KM E+KE+ +EE+ +T+N+EDE LD + I+ E
Sbjct: 23 EDMKMEEEKEML---EPKEESIETDNNEDEAGNLDDSEIKTEE 62
>Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical
protein F10D11.2 protein.
Length = 460
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 538 EMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVEN 660
EMN +L I +++IY GF A+ NY + + N
Sbjct: 8 EMNPQLNFPISDKTIYQMGFNSSAAQPSAANYVTESNSLTN 48
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 177 KSEEIKMTEDKEVTVETNGQEENAKTENSEDETELDIAIIRQVE 308
+ E+ + ED+EV + + +EE E E + E +I +I + E
Sbjct: 1429 EEEDEEEVEDEEVDEDASDEEEEVDGEEDESDDEENIELIEKSE 1472
>AF040657-4|AAB95053.1| 261|Caenorhabditis elegans Hypothetical
protein T20H9.4 protein.
Length = 261
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Frame = +3
Query: 198 TEDKEVTVETNGQEENAKTENSEDETELDIAIIRQ----VEYY-FGD-----VNLHRDKF 347
TED TV NGQ++ + E ++ + D+A+I + +E Y GD V++ +D F
Sbjct: 52 TEDGGTTVHHNGQKKRIEGEQYKERSIKDLAVIFKHASILELYNLGDNVKLLVDILKDSF 111
Query: 348 LQ-EQIKLD 371
+ E IKL+
Sbjct: 112 IHVESIKLN 120
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 526 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRL 705
+P+P E+++ E+ R +YA +A + D + Q ++ ++ +T KR
Sbjct: 158 KPVPLTPEQIKTEVIERFVYAAKYAYETGFDGV-----QLHGAHGYLLAQFTSPTTNKRT 212
Query: 706 --FKGSV 720
+ GSV
Sbjct: 213 DHYGGSV 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,669,290
Number of Sequences: 27780
Number of extensions: 350965
Number of successful extensions: 1402
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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