Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_H10
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125955-5|AAO12427.1|  273|Caenorhabditis elegans Hypothetical ...   183   1e-46
AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical ...   183   1e-46
AF125955-4|AAO12428.1|  181|Caenorhabditis elegans Hypothetical ...    46   5e-05
Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical pr...    36   0.037
U41545-4|AAK39134.1|  665|Caenorhabditis elegans Temporarily ass...    29   4.3  
AF014940-1|AAB63933.1|  143|Caenorhabditis elegans Hypothetical ...    28   9.8  

>AF125955-5|AAO12427.1|  273|Caenorhabditis elegans Hypothetical
           protein F46E10.10b protein.
          Length = 273

 Score =  183 bits (446), Expect = 1e-46
 Identities = 101/211 (47%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
 Frame = +3

Query: 192 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 371
           M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+     +LEGVV EL DC
Sbjct: 1   MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60

Query: 372 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 551
           ALP L  V+   + + AF  +  AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61  ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120

Query: 552 RKDVKVLVCWQPSQYKCSNMF*ICSIYSKRKFHCHDSS-----*SKQGSVPTCC*NWSTV 716
           +   KV+V   P+    +N F I + Y+  K    + S        +          +T+
Sbjct: 121 KPTTKVIVVGNPAN---TNAF-IAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTI 176

Query: 717 XDVKRVIIWGNHSSTQFPDASNAVAIVGGAQ 809
            +VK VIIWGNHS TQFPD ++A     G +
Sbjct: 177 GNVKNVIIWGNHSGTQFPDVTHATVNKNGTE 207


>AF125955-3|AAD14720.1|  336|Caenorhabditis elegans Hypothetical
           protein F46E10.10a protein.
          Length = 336

 Score =  183 bits (446), Expect = 1e-46
 Identities = 101/211 (47%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
 Frame = +3

Query: 192 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 371
           M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+     +LEGVV EL DC
Sbjct: 1   MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60

Query: 372 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 551
           ALP L  V+   + + AF  +  AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61  ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120

Query: 552 RKDVKVLVCWQPSQYKCSNMF*ICSIYSKRKFHCHDSS-----*SKQGSVPTCC*NWSTV 716
           +   KV+V   P+    +N F I + Y+  K    + S        +          +T+
Sbjct: 121 KPTTKVIVVGNPAN---TNAF-IAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTI 176

Query: 717 XDVKRVIIWGNHSSTQFPDASNAVAIVGGAQ 809
            +VK VIIWGNHS TQFPD ++A     G +
Sbjct: 177 GNVKNVIIWGNHSGTQFPDVTHATVNKNGTE 207


>AF125955-4|AAO12428.1|  181|Caenorhabditis elegans Hypothetical
           protein F46E10.10c protein.
          Length = 181

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +3

Query: 708 STVXDVKRVIIWGNHSSTQFPDASNAVAIVGGAQ 809
           +T+ +VK VIIWGNHS TQFPD ++A     G +
Sbjct: 19  TTIGNVKNVIIWGNHSGTQFPDVTHATVNKNGTE 52



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +1

Query: 655 MTRLDQNRAQSQLAAKIG 708
           MTRLD NRA +QLA K G
Sbjct: 1   MTRLDHNRALAQLALKTG 18


>Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical
           protein K10D3.4 protein.
          Length = 922

 Score = 35.9 bits (79), Expect = 0.037
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
 Frame = +2

Query: 200 TYKSCCNWC----CRTNCIL-TSLSN-------CVWSSFWTSTTCLPPPS*YCAYDGCT* 343
           TYK C ++C        CI  T+L++       C  SS   STTC  P + YC YDG T 
Sbjct: 453 TYKECQDYCRDARSEPQCIQGTALTDSNGNFIICGGSSA-ASTTC--PANHYCYYDGTTY 509

Query: 344 RCCHGVGRLCSATFGWGSS 400
            CC      CS ++  G+S
Sbjct: 510 GCCPTQAYTCSLSYKSGAS 528


>U41545-4|AAK39134.1|  665|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 52 protein.
          Length = 665

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = -3

Query: 662 RVMAVKFSFGIDGAYLEHIRAFVLAGLPTNKDLHIFTSRFVQSLALLFED 513
           R++ ++ +FG+DG  LE  R  +  G+   ++L+  ++ + +++  LF D
Sbjct: 236 RLLQIQLNFGLDGHILEPGRVLLKEGMLYKRELN-GSANYQETVVFLFND 284


>AF014940-1|AAB63933.1|  143|Caenorhabditis elegans Hypothetical
           protein W02D7.3 protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 415 SGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRKTGC 290
           + +A   +P  S  ++S  S  + S+TP   A+SRR    GC
Sbjct: 71  TNYAKRHSPPPSYSSRSKQSSVSSSATPTKSAVSRRNYLAGC 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,846,628
Number of Sequences: 27780
Number of extensions: 389409
Number of successful extensions: 1208
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)