Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_H08
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679           30   2.6  
03_01_0226 + 1795120-1795686,1796040-1796171                           28   8.0  

>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
          Length = 939

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 390 SKPGSTMHELGKLIYMKLHDLHWEVRDSALEL 485
           S P +T+HE+G L  ++  D++W + D   ++
Sbjct: 636 SAPSTTLHEMGSLTELRYLDINWCIGDMCSDM 667


>03_01_0226 + 1795120-1795686,1796040-1796171
          Length = 232

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 324 PXNVITVTIKKFLPPNLSLLLESKPGSTMHELGKLIY 434
           P   + V+ K F    L+ L E KPG T+H+   +I+
Sbjct: 180 PERRLKVSYKAFEEAELAKLKEEKPGLTLHQYKDMIW 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,065,806
Number of Sequences: 37544
Number of extensions: 242628
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)