Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_H06
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK222887-1|BAD96607.1|  557|Homo sapiens PET112-like variant pro...    81   7e-15
BC130348-1|AAI30349.1|  557|Homo sapiens PET112-like (yeast) pro...    80   1e-14
AF026851-1|AAD08640.1|  557|Homo sapiens cytochrome oxidase asse...    80   1e-14
AC092611-1|AAY40897.1|  557|Homo sapiens unknown protein.              80   1e-14

>AK222887-1|BAD96607.1|  557|Homo sapiens PET112-like variant
           protein.
          Length = 557

 Score = 80.6 bits (190), Expect = 7e-15
 Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
 Frame = +2

Query: 53  PELPESSRKXLIENYQLRPEAAIQIVNEPILLKYFVDLAEE-RSQSTKIANLLINELLTV 229
           PELP  +R+ L++ Y +  E +  ++NE  LL++F ++ +E R++  K+ + ++N  L  
Sbjct: 374 PELPSVTREKLVQQYGMLLEHSFTLLNEVGLLEFFQNVIKETRAEPKKVTSWVLNTFLGY 433

Query: 230 LNKNKLDISDCPITLRQXXXXXXXXXXXXISLEVFKNVLDDLVISSDSNIMPSKIIQEKN 409
           L +  L +S+ P+T               IS    K V ++L         P +I+ EK 
Sbjct: 434 LKQQNLAVSESPVTPSALAELLDLLDSRTISSSAAKQVFEELWKREGKT--PGQIVSEKQ 491

Query: 410 WTLISDETEIAKFCIEIIENNPKLVKQYKEGKVKVLKALLGVMSKNSQNKFD 565
             L+ D+  + + C  ++E +P++V   K+   + +  L+G++ K +Q++ D
Sbjct: 492 LELMQDQGALEQLCHSVMEAHPQVVMDVKDRNPRAINKLIGLVRKATQSRAD 543


>BC130348-1|AAI30349.1|  557|Homo sapiens PET112-like (yeast)
           protein.
          Length = 557

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 44/172 (25%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
 Frame = +2

Query: 53  PELPESSRKXLIENYQLRPEAAIQIVNEPILLKYFVDLAEE-RSQSTKIANLLINELLTV 229
           PELP  +R+ L++ Y +  E +  ++NE  LL++F ++ +E R++  K+ + ++N  L  
Sbjct: 374 PELPSVTREKLVQQYGMLLEHSFTLLNEVGLLEFFQNVIKETRAEPKKVTSWVLNTFLGY 433

Query: 230 LNKNKLDISDCPITLRQXXXXXXXXXXXXISLEVFKNVLDDLVISSDSNIMPSKIIQEKN 409
           L +  L +S+ P+T               IS    K V ++L         P +I+ EK 
Sbjct: 434 LKQQNLAVSESPVTPSALAELLDLLDSRTISSSAAKQVFEELWKREGKT--PGQIVSEKQ 491

Query: 410 WTLISDETEIAKFCIEIIENNPKLVKQYKEGKVKVLKALLGVMSKNSQNKFD 565
             L+ D+  + + C  ++E +P++V   K    + +  L+G++ K +Q++ D
Sbjct: 492 LELMQDQGALEQLCHSVMEAHPQVVMDVKNRNPRAINKLIGLVRKATQSRAD 543


>AF026851-1|AAD08640.1|  557|Homo sapiens cytochrome oxidase
           assembly factor protein.
          Length = 557

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 44/172 (25%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
 Frame = +2

Query: 53  PELPESSRKXLIENYQLRPEAAIQIVNEPILLKYFVDLAEE-RSQSTKIANLLINELLTV 229
           PELP  +R+ L++ Y +  E +  ++NE  LL++F ++ +E R++  K+ + ++N  L  
Sbjct: 374 PELPSVTREKLVQQYGMLLEHSFTLLNEVGLLEFFQNVIKETRAEPKKVTSWVLNTFLGY 433

Query: 230 LNKNKLDISDCPITLRQXXXXXXXXXXXXISLEVFKNVLDDLVISSDSNIMPSKIIQEKN 409
           L +  L +S+ P+T               IS    K V ++L         P +I+ EK 
Sbjct: 434 LKQQNLAVSESPVTPSALAELLDLLDSRTISSSAAKQVFEELWKREGKT--PGQIVSEKQ 491

Query: 410 WTLISDETEIAKFCIEIIENNPKLVKQYKEGKVKVLKALLGVMSKNSQNKFD 565
             L+ D+  + + C  ++E +P++V   K    + +  L+G++ K +Q++ D
Sbjct: 492 LELMQDQGALEQLCHSVMEAHPQVVMDVKNRNPRAINKLIGLVRKATQSRAD 543


>AC092611-1|AAY40897.1|  557|Homo sapiens unknown protein.
          Length = 557

 Score = 79.8 bits (188), Expect = 1e-14
 Identities = 44/172 (25%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
 Frame = +2

Query: 53  PELPESSRKXLIENYQLRPEAAIQIVNEPILLKYFVDLAEE-RSQSTKIANLLINELLTV 229
           PELP  +R+ L++ Y +  E +  ++NE  LL++F ++ +E R++  K+ + ++N  L  
Sbjct: 374 PELPSVTREKLVQQYGMLLEHSFTLLNEVGLLEFFQNVIKETRAEPKKVTSWVLNTFLGY 433

Query: 230 LNKNKLDISDCPITLRQXXXXXXXXXXXXISLEVFKNVLDDLVISSDSNIMPSKIIQEKN 409
           L +  L +S+ P+T               IS    K V ++L         P +I+ EK 
Sbjct: 434 LKQQNLAVSESPVTPSALAELLDLLDSRTISSSAAKQVFEELWKREGKT--PGQIVSEKQ 491

Query: 410 WTLISDETEIAKFCIEIIENNPKLVKQYKEGKVKVLKALLGVMSKNSQNKFD 565
             L+ D+  + + C  ++E +P++V   K    + +  L+G++ K +Q++ D
Sbjct: 492 LELMQDQGALEQLCHSVMEAHPQVVMDVKNRNPRAINKLIGLVRKATQSRAD 543


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,732,415
Number of Sequences: 237096
Number of extensions: 1219069
Number of successful extensions: 6001
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5999
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)