Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_H06
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3463|AAF56239.2|  516|Drosophila melanogaster CG5463-PA...   107   2e-23
BT001642-1|AAN71397.1|  465|Drosophila melanogaster RE40994p pro...    74   3e-13

>AE014297-3463|AAF56239.2|  516|Drosophila melanogaster CG5463-PA
           protein.
          Length = 516

 Score =  107 bits (258), Expect = 2e-23
 Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
 Frame = +2

Query: 53  PELPESSRKXLIENYQLRPEAAIQIVNEPILLKYFVDLAEERSQ--STKIANLLINELLT 226
           PELPE +R+ L+E + L  E AI +VNEPILL +F+ +    S   +  I N LIN+LLT
Sbjct: 329 PELPEDTRQRLVEQHNLNAETAIILVNEPILLDHFLSITRSLSDLPNKVICNFLINDLLT 388

Query: 227 VLNKNKLDISDCPITLRQXXXXXXXXXXXXISLEVFKNVLDDLVISSDSNIMPSKIIQEK 406
             NK  LD+ DC I                I+L+  + ++D  ++ ++     S++I+  
Sbjct: 389 YCNKLNLDVEDCSIKADDLKDILMSLHAELINLQAARQLVD--LLHNNPKAKVSELIELH 446

Query: 407 NWTLISDETEIAKFCIEIIENNPKLVKQYKEGKVKVLKALLGVMSKNSQNKFDMSLXV*N 586
           +   I    EI   C   I N  K V+QY++GK K L A+ G ++K S  K +M L V  
Sbjct: 447 SLQQICSPDEIENLCQLAIANQAKAVEQYQKGKAKALFAIAGEVAKLSSQKANMKLVVQR 506

Query: 587 NGRGIEKVNK 616
             + ++  NK
Sbjct: 507 LEKLLKPTNK 516


>BT001642-1|AAN71397.1|  465|Drosophila melanogaster RE40994p
           protein.
          Length = 465

 Score = 73.7 bits (173), Expect = 3e-13
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = +2

Query: 53  PELPESSRKXLIENYQLRPEAAIQIVNEPILLKYFVDLAEERSQ--STKIANLLINELLT 226
           PELPE +R+ L+E + L  E AI +VNEPILL +F+ +    S   +  I N LIN+LLT
Sbjct: 353 PELPEDTRQRLVEQHNLNAETAIILVNEPILLDHFLSITRSLSDLPNKVICNFLINDLLT 412

Query: 227 VLNKNKLDISDCPITLRQXXXXXXXXXXXXISLEVFKNVLD 349
             NK  LD+ DC I                I+L+  + ++D
Sbjct: 413 YCNKLNLDVEDCSIKADDLKDILMSLHAELINLQAARQLVD 453


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,609,448
Number of Sequences: 53049
Number of extensions: 376489
Number of successful extensions: 829
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)