Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_H05
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    29   3.6  
12_02_0082 - 13372997-13373863,13373928-13374386                       28   8.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  
04_01_0015 - 235068-235231,238714-239701                               28   8.3  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = +1

Query: 613 CWRFSIGSAPLTSITXIDAQVRGGETRQDYKDTRRFPLXAPRCALLFRPL--PLTGYLFP 786
           CWR  +        T  D Q    +    +KD    P   P C L+F PL  PL   L+ 
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 787 F 789
           F
Sbjct: 343 F 343


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 739 CALLFRPLPLTGYLFPFLPS 798
           CALLF P+PL G     LPS
Sbjct: 165 CALLFSPMPLDGPTLGLLPS 184


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 394 NESAN---ARGEAVCVLGALPLPRSLTRCAR 477
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_01_0015 - 235068-235231,238714-239701
          Length = 383

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 755 DPCRLXDTCSPFSL 796
           DPCR  DTC PF++
Sbjct: 306 DPCRSYDTCGPFTI 319


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,589,030
Number of Sequences: 37544
Number of extensions: 324513
Number of successful extensions: 903
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)