Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_H01
(880 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 24 1.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 2.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.7
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 3.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 4.9
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 23 4.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 8.6
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 600 WRSVSIVLS*LFMWVTVL 653
W+ V++VL LF+WV L
Sbjct: 474 WKFVAMVLDRLFLWVFTL 491
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 600 WRSVSIVLS*LFMWVTVL 653
W+ V++VL LF+W+ L
Sbjct: 511 WKYVAMVLDRLFLWIFTL 528
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 600 WRSVSIVLS*LFMWVTVL 653
W+ V++VL LF+W+ L
Sbjct: 511 WKYVAMVLDRLFLWIFTL 528
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 600 WRSVSIVLS*LFMWVTVL 653
W+ V++VL LF+W+ L
Sbjct: 506 WKYVAMVLDRLFLWIFTL 523
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 130 SRSNNVFLAQKYKNSFRPSYRTSNNYXKIL 41
S SNN YK ++ + +NNY K L
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNNNYNKKL 112
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 130 SRSNNVFLAQKYKNSFRPSYRTSNNYXKIL 41
S SNN YK ++ + +NNY K L
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNNNYNKKL 112
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 377 PRQEPSPNWLYQKLGYSGILI 315
P+ P PNW K G G I
Sbjct: 107 PKLTPYPNWAQNKAGACGSAI 127
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 4.9
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +3
Query: 582 KGTSRSWRSVSIVLS*LFMWV 644
+ W+ V++VL +F+W+
Sbjct: 533 ESVEEDWKYVAMVLDRIFLWI 553
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +1
Query: 208 KEKDGQTKNQLVYGIMRYVAWGYFLIRSQRSTAHRKIKIPEYP 336
KEK+ + N +GI + G+ +R ++++ +K +P
Sbjct: 40 KEKNSASLNSENFGIFKRALMGFQGVRGKKNSIINDVKNELFP 82
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 133 ISRSNNVFLAQKYKNSFRPSYRTSNNYXKILXEFPI 26
IS +N + Y N+++P Y N +I PI
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNIINIEQIPVPVPI 350
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 594 RSWRSVSIVLS*LFMWV 644
+ W V++VL LF+W+
Sbjct: 476 QDWGFVAMVLDRLFLWI 492
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,779
Number of Sequences: 438
Number of extensions: 5201
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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